SampleCore: Sampling Strategies for Constructing Core Collections

Version : 0.0.0.9000; License: GPL-2|GPL-3

Aravind, J., Roy, Suman and Singh, Anju M.

Division of Germplasm Conservation, ICAR-National Bureau of Plant Genetic Resources, New Delhi.

---

---

Description

Implements several sampling strategies for construction of core collections. These include 1) Stratified sampling based on group size 2) Stratified sampling based on group diversity 3) Sampling based on genetic distance between accessions. See the vignette for more, including full list of citations for the methods implemented.

Installation

The development version can be installed from github as follows:

# Install development version from Github
devtools::install_github("aravind-j/SampleCore")

What’s new

To know whats new in this version type:

news(package='SampleCore')

Links

Github page

Documentation website

Citing SampleCore

To cite the methods in the package use:

citation("SampleCore")

To cite the R package 'SampleCore' in publications use:

  Aravind, J., Roy, S., and Singh, A. M. ().  SampleCore: Sampling Strategies for Constructing Core
  Collections. R package version 0.0.0.9000, https://aravind-j.github.io/SampleCore/.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {SampleCore: Sampling Strategies for Constructing Core Collections},
    author = {J. Aravind and Suman Roy and Anju Mahendru Singh},
    note = {R package version 0.0.0.9000 https://aravind-j.github.io/SampleCore/},
  }

This free and open-source software implements academic research by the authors and co-workers. If you use
it, please support the project by citing the package.