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migrate from python2 to python3 #22

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0bcc05b
Add attr judge about perf_obj and net_obj
hualongfeng Jun 15, 2020
96570f5
Replace await with r_await and w_await
hualongfeng Jun 15, 2020
ca37e3f
Replace svctm with util in disk_module.py
hualongfeng Jul 6, 2020
f0027eb
migrate from python2 to python3
Jan 18, 2022
05a6f2d
add memory plot in single node
hualongfeng Jan 19, 2022
e0a5bf1
Update README.md
hualongfeng Feb 15, 2022
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4 changes: 2 additions & 2 deletions PAT-post-processing/cpu_module.py
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/usr/bin/python2
#!/usr/bin/python3
#
# Copyright (c) 2015, Intel Corporation
#
Expand Down Expand Up @@ -497,7 +497,7 @@ def write_excel(cluster, wb):
def csv_writer(cluster, csv_path_cpu):
"""write data to a CSV file path"""

csv_file = open(csv_path_cpu, "wb")
csv_file = open(csv_path_cpu, "w")
for node in cluster:
if hasattr(node, 'cpu_obj'):
node_data = node.cpu_obj.data_array
Expand Down
109 changes: 66 additions & 43 deletions PAT-post-processing/disk_module.py
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/usr/bin/python2
#!/usr/bin/python3
#
# Copyright (c) 2015, Intel Corporation
#
Expand Down Expand Up @@ -55,8 +55,9 @@ def extract_data(self):
self.ts_index = self.title_line.index("TimeStamp")
self.rkbps_index = self.title_line.index("rkB/s")
self.wkbps_index = self.title_line.index("wkB/s")
self.await_index = self.title_line.index("await")
self.svctm_index = self.title_line.index("svctm")
self.r_await_index = self.title_line.index("r_await")
self.w_await_index = self.title_line.index("w_await")
self.util_index = self.title_line.index("%util")
del self.data_array[0]

self.time_stamp_array = []
Expand All @@ -68,15 +69,17 @@ def extract_data(self):
self.wps = []
self.rkbps = []
self.wkbps = []
self.await = []
self.svctm = []
self.r_await = []
self.w_await = []
self.util = []
for self.row in self.data_array:
self.rps.append(float(self.row[self.rps_index]))
self.wps.append(float(self.row[self.wps_index]))
self.rkbps.append(float(self.row[self.rkbps_index]))
self.wkbps.append(float(self.row[self.wkbps_index]))
self.await.append(float(self.row[self.await_index]))
self.svctm.append(float(self.row[self.svctm_index]))
self.r_await.append(float(self.row[self.r_await_index]))
self.w_await.append(float(self.row[self.w_await_index]))
self.util.append(float(self.row[self.util_index]))

self.ts_sum = []
self.avg_ind = 0
Expand Down Expand Up @@ -105,11 +108,14 @@ def extract_data(self):
self.rkbps_sum = self.get_sum(self.rkbps_index, self.rkbps)
self.avg_array.append(self.rkbps_sum)

self.await_sum = self.get_sum(self.await_index, self.await)
self.avg_array.append(self.await_sum)
self.r_await_sum = self.get_sum(self.r_await_index, self.r_await)
self.avg_array.append(self.r_await_sum)

self.svctm_sum = self.get_sum(self.svctm_index, self.svctm)
self.avg_array.append(self.svctm_sum)
self.w_await_sum = self.get_sum(self.w_await_index, self.w_await)
self.avg_array.append(self.w_await_sum)

self.util_sum = self.get_sum(self.util_index, self.util)
self.avg_array.append(self.util_sum)

self.data_array.insert(0, self.title_line)
return self.avg_array
Expand Down Expand Up @@ -138,8 +144,9 @@ def get_avg_data(cluster, name_node):
rps_dic = {}
wkbps_dic = {}
rkbps_dic = {}
await_dic = {}
svctm_dic = {}
r_await_dic = {}
w_await_dic = {}
util_dic = {}
count_dic = {}

for node in cluster:
Expand All @@ -164,14 +171,18 @@ def get_avg_data(cluster, name_node):
rkbps += node.disk_obj.avg_array[4][index]
rkbps_dic.update(dict([(node.disk_obj.ts_sum[index],
rkbps)]))
await = await_dic.get(node.disk_obj.ts_sum[index])
await += node.disk_obj.avg_array[5][index]
await_dic.update(dict([(node.disk_obj.ts_sum[index],
await)]))
svctm = svctm_dic.get(node.disk_obj.ts_sum[index])
svctm += node.disk_obj.avg_array[6][index]
svctm_dic.update(dict([(node.disk_obj.ts_sum[index],
svctm)]))
r_await = r_await_dic.get(node.disk_obj.ts_sum[index])
r_await += node.disk_obj.avg_array[5][index]
r_await_dic.update(dict([(node.disk_obj.ts_sum[index],
r_await)]))
w_await = w_await_dic.get(node.disk_obj.ts_sum[index])
w_await += node.disk_obj.avg_array[6][index]
w_await_dic.update(dict([(node.disk_obj.ts_sum[index],
w_await)]))
util = util_dic.get(node.disk_obj.ts_sum[index])
util += node.disk_obj.avg_array[7][index]
util_dic.update(dict([(node.disk_obj.ts_sum[index],
util)]))
cnt = count_dic.get(node.disk_obj.ts_sum[index])
cnt += 1
count_dic.update(dict([(node.disk_obj.ts_sum[
Expand All @@ -185,10 +196,12 @@ def get_avg_data(cluster, name_node):
index], node.disk_obj.avg_array[3][index])]))
rkbps_dic.update(dict([(node.disk_obj.ts_sum[
index], node.disk_obj.avg_array[4][index])]))
await_dic.update(dict([(node.disk_obj.ts_sum[
r_await_dic.update(dict([(node.disk_obj.ts_sum[
index], node.disk_obj.avg_array[5][index])]))
svctm_dic.update(dict([(node.disk_obj.ts_sum[
w_await_dic.update(dict([(node.disk_obj.ts_sum[
index], node.disk_obj.avg_array[6][index])]))
util_dic.update(dict([(node.disk_obj.ts_sum[
index], node.disk_obj.avg_array[7][index])]))
count_dic.update(dict([(node.disk_obj.ts_sum[
index], 1)]))

Expand All @@ -198,15 +211,17 @@ def get_avg_data(cluster, name_node):
wps = wps_dic.values()
rkbps = rkbps_dic.values()
wkbps = wkbps_dic.values()
await = await_dic.values()
svctm = svctm_dic.values()
r_await = r_await_dic.values()
w_await = w_await_dic.values()
util = util_dic.values()
count = count_dic.values()
rps = [x for y, x in sorted(zip(ts, rps))]
wps = [x for y, x in sorted(zip(ts, wps))]
rkbps = [x for y, x in sorted(zip(ts, rkbps))]
wkbps = [x for y, x in sorted(zip(ts, wkbps))]
await = [x for y, x in sorted(zip(ts, await))]
svctm = [x for y, x in sorted(zip(ts, svctm))]
r_await = [x for y, x in sorted(zip(ts, r_await))]
w_await = [x for y, x in sorted(zip(ts, w_await))]
util = [x for y, x in sorted(zip(ts, util))]
count = [x for y, x in sorted(zip(ts, count))]
ts = sorted(ts)

Expand All @@ -218,11 +233,13 @@ def get_avg_data(cluster, name_node):
wkbps[index] = row / count[index]
for index, row in enumerate(rkbps):
rkbps[index] = row / count[index]
for index, row in enumerate(await):
await[index] = row / count[index]
for index, row in enumerate(svctm):
svctm[index] = row / count[index]
avg_array = [ts, wps, rps, wkbps, rkbps, await, svctm]
for index, row in enumerate(r_await):
r_await[index] = row / count[index]
for index, row in enumerate(w_await):
w_await[index] = row / count[index]
for index, row in enumerate(util):
util[index] = row / count[index]
avg_array = [ts, wps, rps, wkbps, rkbps, r_await, w_await, util]
return avg_array
else:
return None
Expand Down Expand Up @@ -305,9 +322,11 @@ def plot_graph(data, pp, graph_title):
fig.text(0.14, 0.89, fig_caption, fontsize=10,
horizontalalignment='left', verticalalignment='top')
# plot graphs
ax.plot(x, data[5], label='await',
ax.plot(x, data[5], label='r_await',
color='#00297A', alpha=0.9, linewidth=0.5, rasterized=True)
ax.plot(x, data[6], label='svctm',
ax.plot(x, data[5], label='w_await',
color='#004f7a', alpha=0.9, linewidth=0.5, rasterized=True)
ax.plot(x, data[6], label='util',
color='#800000', alpha=0.9, linewidth=0.5, rasterized=True)
ax.fill_between(x, 0, data[5], facecolor='#00297A',
alpha=0.45, linewidth=0.01, rasterized=True)
Expand Down Expand Up @@ -351,16 +370,20 @@ def get_data_for_graph(data_array):
for entry in data_array[4]:
rkbps.append(float(entry))
new_rkbps = get_graph_mean(x, rkbps)
await = []
r_await = []
for entry in data_array[5]:
await.append(float(entry))
new_await = get_graph_mean(x, await)
svctm = []
r_await.append(float(entry))
new_r_await = get_graph_mean(x, r_await)
w_await = []
for entry in data_array[6]:
svctm.append(float(entry))
new_svctm = get_graph_mean(x, svctm)
return [new_ts, new_wps, new_rps, new_wkbps, new_rkbps, new_await,
new_svctm], x
w_await.append(float(entry))
new_w_await = get_graph_mean(x, w_await)
util = []
for entry in data_array[7]:
util.append(float(entry))
new_util = get_graph_mean(x, util)
return [new_ts, new_wps, new_rps, new_wkbps, new_rkbps, new_r_await, new_w_await,
new_util], x
else:
return data_array, x

Expand Down Expand Up @@ -441,7 +464,7 @@ def write_excel(cluster, wb):
def csv_writer(cluster, csv_path_disk):
"""write data to a CSV file path"""

csv_file = open(csv_path_disk, "wb")
csv_file = open(csv_path_disk, "w")
for node in cluster:
if hasattr(node, 'disk_obj'):
node_data = node.disk_obj.data_array
Expand Down
4 changes: 2 additions & 2 deletions PAT-post-processing/memory_module.py
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/usr/bin/python2
#!/usr/bin/python3
#
# Copyright (c) 2015, Intel Corporation
#
Expand Down Expand Up @@ -378,7 +378,7 @@ def write_excel(cluster, wb):
def csv_writer(cluster, csv_path_memory):
"""write data to a CSV file path"""

csv_file = open(csv_path_memory, "wb")
csv_file = open(csv_path_memory, "w")
for node in cluster:
if hasattr(node, 'memory_obj'):
node_data = node.memory_obj.data_array
Expand Down
4 changes: 2 additions & 2 deletions PAT-post-processing/net_module.py
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Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
#!/usr/bin/python2
#!/usr/bin/python3
#
# Copyright (c) 2015, Intel Corporation
#
Expand Down Expand Up @@ -316,7 +316,7 @@ def write_excel(cluster, wb):
def csv_writer(cluster, csv_path_net):
"""write data to a CSV file path"""

csv_file = open(csv_path_net, "wb")
csv_file = open(csv_path_net, "w")
for node in cluster:
if hasattr(node, 'net_obj'):
node_data = node.net_obj.data_array
Expand Down
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