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2 changes: 2 additions & 0 deletions .Rbuildignore
Original file line number Diff line number Diff line change
Expand Up @@ -18,3 +18,5 @@
^codemeta\.json$
^CODE_OF_CONDUCT\.md$
^src/.*\.o$
^dev\.R$
^paper$
21 changes: 19 additions & 2 deletions .github/CONTRIBUTING.md
Original file line number Diff line number Diff line change
Expand Up @@ -50,7 +50,15 @@ Please note that the tidyhydro project is released with a [Contributor Code of C
### GOF
-[ ] KGE''

-[ ] KGE Score
-[ ] KGE Score [@knobenTechnicalNoteInherent2019]

-[ ] Weighted KGE [@mizukamiChoiceCalibrationMetrics2019]

-[ ] MSDR - mean squared deviation ratio [@oliverTutorialGuideGeostatistics2014]

-[x] RMSE

-[ ] NRMSE - normalized root mean squared error

### Regression
-[ ] PPCC - maximizes the probability plot correlation coefficient [@helselStatisticalMethodsWater2002, p.253]
Expand All @@ -61,4 +69,13 @@ Please note that the tidyhydro project is released with a [Contributor Code of C

-[ ] MSPE - model standard percentage error log and nonlog [@rasmussenGuidelinesProceduresComputing2009, p. 13]

-[ ] RMSE
### Stats
-[ ] MAD

-[x] Geometric Mean (GM)

-[x] Coefficient of Variation (Cv)

-[ ] Coefficient of Skewness (g or Cs)

-[ ] Others measures of descriptive stats mentioned in Helsel et al. (2020)
116 changes: 58 additions & 58 deletions .github/workflows/check-no-suggests.yaml
Original file line number Diff line number Diff line change
@@ -1,59 +1,59 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow only directly installs "hard" dependencies, i.e. Depends,
# Imports, and LinkingTo dependencies. Notably, Suggests dependencies are never
# installed, with the exception of testthat, knitr, and rmarkdown. The cache is
# never used to avoid accidentally restoring a cache containing a suggested
# dependency.
on:
push:
branches: master
pull_request:
name: check-no-suggests.yaml
permissions: read-all
jobs:
check-no-suggests:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: ubuntu-latest, r: 'release'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
dependencies: '"hard"'
cache: false
extra-packages: |
any::rcmdcheck
any::testthat
any::knitr
any::rmarkdown
needs: check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
#
# NOTE: This workflow only directly installs "hard" dependencies, i.e. Depends,
# Imports, and LinkingTo dependencies. Notably, Suggests dependencies are never
# installed, with the exception of testthat, knitr, and rmarkdown. The cache is
# never used to avoid accidentally restoring a cache containing a suggested
# dependency.
on:
push:
branches: master
pull_request:

name: check-no-suggests.yaml

permissions: read-all

jobs:
check-no-suggests:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: ubuntu-latest, r: 'release'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
dependencies: '"hard"'
cache: false
extra-packages: |
any::rcmdcheck
any::testthat
any::knitr
any::rmarkdown
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'
100 changes: 50 additions & 50 deletions .github/workflows/check-r-pkg.yaml
Original file line number Diff line number Diff line change
@@ -1,50 +1,50 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: master
pull_request:
branches: master
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: master
pull_request:
branches: master

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")'
98 changes: 49 additions & 49 deletions .github/workflows/pkgdown.yaml
Original file line number Diff line number Diff line change
@@ -1,49 +1,49 @@
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: master
pull_request:
release:
types: [published]
workflow_dispatch:
name: pkgdown.yaml
permissions: read-all
jobs:
pkgdown:
runs-on: ubuntu-latest
# Only restrict concurrency for non-PR jobs
concurrency:
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
permissions:
contents: write
steps:
- uses: actions/checkout@v4
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::pkgdown, local::.
needs: website
- name: Build site
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
shell: Rscript {0}
- name: Deploy to GitHub pages 🚀
if: github.event_name != 'pull_request'
uses: JamesIves/github-pages-deploy-action@v4.5.0
with:
clean: false
branch: gh-pages
folder: docs
# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: master
pull_request:
release:
types: [published]
workflow_dispatch:

name: pkgdown.yaml

permissions: read-all

jobs:
pkgdown:
runs-on: ubuntu-latest
# Only restrict concurrency for non-PR jobs
concurrency:
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
permissions:
contents: write
steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::pkgdown, local::.
needs: website

- name: Build site
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
shell: Rscript {0}

- name: Deploy to GitHub pages 🚀
if: github.event_name != 'pull_request'
uses: JamesIves/github-pages-deploy-action@v4.5.0
with:
clean: false
branch: gh-pages
folder: docs
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