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Introduce mm2pass command#8

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mparker2 wants to merge 4 commits intomasterfrom
mm2pass
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Introduce mm2pass command#8
mparker2 wants to merge 4 commits intomasterfrom
mm2pass

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@mparker2
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@mparker2 mparker2 commented Mar 9, 2021

Added mm2pass command which wraps minimap2, samtools, and 2passtools score/filter, performing all the steps of two pass alignment.

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todo: documentation

@MakeTheBrainHappy
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Great potential addition!

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