Develop#14
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* split client out further into more digestable parts * simplify, factor business logic out of cmd package and into upload and download packages * rearrange some more stuff. Start testing * fix some bugs * abstract out token handling into lowest level request interface * fix a bunch of bugs * adds very minimal docs
* fix missing error check * Initial plan * Fix error wrapping to preserve error chain using fmt.Errorf with %w Co-authored-by: bwalsh <47808+bwalsh@users.noreply.github.com> * Update PR description with completion status Co-authored-by: bwalsh <47808+bwalsh@users.noreply.github.com> * Add /bin/ to .gitignore and remove accidentally committed binary Co-authored-by: bwalsh <47808+bwalsh@users.noreply.github.com> --------- Co-authored-by: Brian Walsh <brian@bwalsh.com> Co-authored-by: copilot-swe-agent[bot] <198982749+Copilot@users.noreply.github.com> Co-authored-by: bwalsh <47808+bwalsh@users.noreply.github.com>
* MinChunkSize: 10MB * fix:improve-multipart #18 * improve OptimalChunkSize.scaleLinear * adds optimal-chunk-size * table-driven tests GetLfsCustomTransferInt * Address PR review comments: fix naming, formatting, and test coverage * Add logging for git config errors and improve documentation structure * Fix spelling: terrabytes → terabytes * adds ProgressEvent * Fix nil pointer dereferences and duplicate progress events - Added nil check for req.Progress in multipart.go to prevent panic - Removed duplicate progress event in singleFile.go (Finalize already emits) - Fixed concurrent BytesSoFar calculation using atomic counter for monotonicity * adds tests * add noop ProgressCallback
* MinChunkSize: 10MB * fix:improve-multipart #18 * improve OptimalChunkSize.scaleLinear * adds optimal-chunk-size * table-driven tests GetLfsCustomTransferInt * Initial plan * Address PR review comments: fix naming, formatting, and test coverage * Add logging for git config errors and improve documentation structure * Fix spelling: terrabytes → terabytes * refactor a bunch of stuff, incorporate latest commits on develop * add g3client * operational data-client * tests passing * add sower client * fix up logging to pass back to main git-drs logger when configured * addresse logging feedbacks * add requestor client and commands * add command validation for collaborator command * fix up releaser * fix PartNumber typo regression * fix partNumber
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* fix tests * make progress logging tied to minChunkSize * refactor/add-url #28 * typo * improve onProgress bytesSinceReport >= 1MB * OnProgressThreshold --------- Co-authored-by: matthewpeterkort <matthewpeterkort@gmail.com>
Contributor
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@matthewpeterkort I think this has been done. If so can you close it? |
Collaborator
Author
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what you mean by close it ? last merge to main was months ago |
Contributor
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@matthewpeterkort my mistake, I misread the target |
* start refactor to support non-gen3 file handling backend * continue build out backend for drs server * lock down data-client version * rearrange data client to support drs server * update apigen * add ci * fix tests * add client support for bulk url signing * remove apigen from data-client * fix imports * move sifon client out of data-client into its own package in syfon repo * fix test * demisitify collaborators command
Test Coverage ReportOverall Coverage: 52.9% Package Coverage
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Test Coverage ReportOverall Coverage: 52.9% Package Coverage
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Test Coverage ReportOverall Coverage: 55.6% Package Coverage
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Contributor
Review Steps 🌀1. Install➜ cd data-client
➜ git fetch --all
➜ git checkout develop
➜ git show --summary --oneline
8e9b714 (HEAD -> develop, origin/develop) update data client
➜ make
--> Building data-client...
Build successful! Binary placed in ./bin/data-client
➜ export PATH=$PATH:./bin
➜ which data-client
./bin/data-client
➜ data-client --version
data-client version 2026.22. Configure
Tip
➜ data-client configure --profile=calypr-dev --cred=~/Downloads/credentials.json --apiendpoint=https://calypr-dev.ohsu.edu
Profile 'calypr-dev' has been configured successfully.3. UploadWithout MetadataCaution Currently encountering a
➜ data-client upload --profile=calypr-dev --upload-path=README.md --bucket calypr
level=ERROR msg="Upload failed" path=data-client/README.md error="failed to get upload URL: 405"
level=ERROR msg="Upload failed" error="failed to get upload URL: 405"With Metadata➜ TODO4. Download➜ TODO |
Test Coverage ReportOverall Coverage: 58.6% Package Coverage
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Test Coverage ReportOverall Coverage: 58.7% Package Coverage
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…es (#34) * update data-client to add support for updated gecko, arborist codebases * change name to calypr-cli * cleanup
Test Coverage ReportOverall Coverage: 60.2% Package Coverage
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Test Coverage ReportOverall Coverage: 60.2% Package Coverage
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3 tasks
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