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feat(delphi): storage v2 P4 — deployable DDL (Delphi2 Dynamo tables + PG migration 000019)#2600

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feat(delphi): storage v2 P4 — deployable DDL (Delphi2 Dynamo tables + PG migration 000019)#2600
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@jucor jucor commented Jul 6, 2026

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Stack 1 / P4 of the Storage V2 effort (design in #2597, §4.2 "DDL" + §7): the deployable DDL for the V2 schema, pinned to the backend definitions from #2598/#2599. Completes Stack 1 (Foundation).

Stacked on #2599 (jc/delphi-storage-v2-p3).

What this adds

DynamoDB — delphi/create_dynamodb_tables.py

  • DELPHI2_TABLE_SCHEMAS + create_delphi2_tables(), wired into create_tables() so the Delphi2_* tables are always created alongside the existing ones (dev, CI dynamodb-init, and instance provisioning all flow through this script).
  • The schemas are an inlined copy, because the script runs standalone in the dynamodb-init container (bare python:3.11-slim + boto3 — it cannot import delphi_storage). The sync test tests/test_delphi_storage_ddl.py::TestDynamoSchemaSync fails CI if the copy ever drifts from delphi_storage.backends.dynamodb.table_schemas("Delphi2_") — the backend stays the single source of truth.

PostgreSQL — server/postgres/migrations/000019_create_delphi_storage.sql

  • Creates schema delphi with the six entities (runs, latest, run_inputs, artifacts, topic_moderation, collective_statements), COLLATE "C" sort keys, the partial claim index, and the zid/rid list indexes — mirroring delphi_storage.backends.postgres.schema_ddl("delphi") statement for statement (drift-tested the same way).
  • Applied by the existing raw-psql runners (bin/run-migrations.sh, bin/db-reset.js); first migration to use a schema, per the design's decision to namespace V2 under delphi.

Proof the deployed artifacts work (not just the test helpers)

tests/test_delphi_storage_ddl.py::TestDeployedStoresPassConformance:

  • applies migration 000019 by raw SQL to a scratch database and runs the full conformance suite against it with ensure_schema off;
  • creates the Delphi2_* tables via create_delphi2_tables() against DynamoDB local and runs the full conformance suite with ensure_tables off.

Both follow the skip-locally / fail-in-GitHub-Actions convention (both services are up in CI).

Testing

  • 6 new DDL tests pass against DynamoDB local (:8002) + dockerized PG 16.
  • Full delphi suite: 406 passed, 30 skipped, 58 xfailed (5 pre-existing DynamoDB-unavailable errors unchanged).
  • python3 -m py_compile create_dynamodb_tables.py — the script stays stdlib+boto3-only.
  • TDD: sync + conformance tests written first (4 failed / 2 skipped), then the schemas and migration generated from the backend definitions.

Stack

🤖 Generated with Claude Code

@jucor jucor force-pushed the jc/delphi-storage-v2-p3 branch from 57be28e to 9ee292b Compare July 6, 2026 15:22
@jucor jucor force-pushed the jc/delphi-storage-v2-p4 branch from 3426ccb to 5eeaaa7 Compare July 6, 2026 15:22
@jucor

jucor commented Jul 6, 2026

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Post-push self-review (Claude subagent) found three issues, now fixed and re-pushed:

  1. create_delphi2_tables ignored DELPHI_STORAGE_TABLE_PREFIX — provisioning would create Delphi2_* while a custom-prefixed deployment's runtime store looked for <prefix>Runs, a silent divergence surfacing only as ResourceNotFoundException. The script now derives table names from the same env var (still stdlib-only), with a moto test pinning it.
  2. Test-cleanup ordering — the sanity assertion in test_create_script_tables_pass_conformance sat outside the try/finally, so a partial table-creation failure could leave Delphi2_* tables behind on the shared DynamoDB-local. Moved inside.
  3. The PG conformance tests silently skipped in CI — the delphi container never received DATABASE_URL and docker compose exec doesn't forward GITHUB_ACTIONS, so the fail-loud-in-CI path was unreachable and the migration-conformance guarantee had no CI enforcement (a pre-existing wiring gap this PR's tests inherited). Fixed: DATABASE_URL added to the delphi service env in docker-compose.test.yml, -e GITHUB_ACTIONS=true added to the pytest exec in python-ci.yml — the PG-backend conformance params from feat(delphi): storage v2 P2 — backend-neutral delphi_storage repository (dual backends + conformance) #2598 now actually run in CI too.

All 7 DDL tests green against DynamoDB local + dockerized PG.

@jucor jucor force-pushed the jc/delphi-storage-v2-p4 branch 2 times, most recently from bc792db to 5a5e0d4 Compare July 6, 2026 15:34
jucor added a commit that referenced this pull request Jul 6, 2026
… pipeline entry points

Implements Stack 2 / P5 of docs/STORAGE_V2_DESIGN.md (§4.4): the pipeline
job id travels ON THE COMMAND LINE instead of the env-var-only propagation
that reached 2 of 18 tables (§3.2).

- delphi_storage/job_id.py — resolve_job_id: explicit CLI value >
  DELPHI_JOB_ID env (transition fallback, removed in a later phase) >
  auto local-<uuid4> for dev runs.
- run_delphi.py — gains --job-id, resolves once, exports DELPHI_JOB_ID for
  un-migrated env readers (same id as the command lines), and appends
  --job-id=<id> to all six stage subprocesses (reset, math, umap 500s,
  501, 502, 700 per layer).
- scripts/job_poller.py — command construction extracted into module-level
  build_job_command() (now unit-testable); FULL_PIPELINE and
  CREATE_NARRATIVE_BATCH commands carry --job-id=<queue job_id>; the
  DELPHI_JOB_ID env export stays for the transition window. 803's existing
  --job-id (the batch-tracking id, a distinct concept) is unchanged.
- Stage entry points all accept --job-id: reset_conversation (CLI moved
  into cli(), main() stays the worker), run_math_pipeline (arg + log only —
  no math-logic change), run_pipeline (threaded into process_conversation,
  replacing the buried env read; auto prefix changes pipeline_run_<uuid> →
  local-<uuid> for bare dev runs), 501, 502 (arg + log, used from P7),
  700 (threaded down to the S3-key builder; 'unknown' fallback preserved),
  801 (arg > env, NO auto-generation — narrative section keys embed the id,
  so a missing one must keep failing loudly downstream).

Tests (TDD; tests/test_job_id_threading.py, RED first):
- resolve_job_id precedence; run_delphi threads one shared id to all six
  stage commands (explicit, auto, and env-fallback variants);
- every stage entry point's --help advertises --job-id;
- process_conversation exposes the job_id parameter;
- poller commands for all three job types (FULL_PIPELINE + 801 carry the
  queue job id; 803 keeps batch_job_id semantics).

Full suite: 424 passed, 30 skipped, 58 xfailed (5 pre-existing
DynamoDB-unavailable errors unchanged); golden snapshots ran and passed —
math outputs untouched.

Stack: P1 #2597, P2 #2598, P3 #2599, P4 #2600, P5 this commit.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
jucor added a commit that referenced this pull request Jul 6, 2026
… + purge tool

Implements the capture half of Stack 2 / P6 (docs/STORAGE_V2_DESIGN.md §4.2
entity 2, §4.4): reproducibility begins with recording EXACTLY what the
pipeline read. The read seam (--input-source, P6b) follows.

- delphi_storage/inputs.py — capture_run_inputs(store, job_id, zid, rid):
  writes the six snapshot kinds as run_inputs items (codec envelopes,
  zstd-compressed votes) and returns per-kind fingerprints (sha256 of the
  canonical uncompressed payload, row_count, max vote created — the P7
  manifest inputs). Key fidelity decisions, pinned by tests:
  - votes = the RAW stream stage 1 consumes: ORDER BY created, raw PG signs
    (the production math path never flips — fetch_votes()'s flip is dead
    code), superseded votes included, order preserved (KMeans init depends
    on vote-encounter order, INVESTIGATION_K_DIVERGENCE.md).
  - The vote SQL is shared BY CONSTRUCTION: run_math_pipeline.py now imports
    VOTES_COUNT_SQL / VOTES_BATCH_SQL from delphi_storage.inputs (strings
    unchanged; golden suite + the e2e SQL pins stay green).
  - comments/participants captured in FULL, including moderated-out rows
    (mod = -1) and banned participants — filtering is pipeline behavior,
    not snapshot behavior.
  - clojure_math_main captured for ALL math_env rows (501 reads env-less
    latest, 801 filters MATH_ENV with a different default — snapshotting
    every env keeps both replayable).
  - derive_votes_latest_unique() reproduces PG's RULE-maintained
    votes_latest_unique from the stream (last vote per (pid, tid) in stream
    order) — tested against a seeded PG table mimicking the RULE.
- delphi_storage/purge.py — purge_job(): deletes every generic-entity
  partition for a job (the §9 GDPR path for snapshot copies).
- run_delphi.py — --snapshot-inputs flag (or DELPHI_SNAPSHOT_INPUTS=1):
  captures before any stage runs, aborts the run on capture failure
  (a run without recorded inputs defeats the point when enabled).
  Off by default until P7's DELPHI_WRITE_MODE subsumes it.

Tests (TDD; tests/test_input_snapshots.py, RED first): 16 tests — raw
stream order/signs, compression, fingerprints, derivation-vs-PG-RULE,
full-row comments/participants, all-env math_main, SQL-parity-by-import,
purge, and the run_delphi hook (flag, env, off-by-default). PG-backed tests
use a seeded scratch database (skip-locally / fail-in-CI convention).

Full suite: 429 passed, 41 skipped, 58 xfailed (5 pre-existing
DynamoDB-unavailable errors unchanged); golden snapshots ran and passed —
math outputs untouched.

Stack: P1 #2597, P2 #2598, P3 #2599, P4 #2600, P5 #2601, P6a this commit.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@jucor jucor force-pushed the jc/delphi-storage-v2-p3 branch from 9ee292b to 5edc451 Compare July 6, 2026 18:48
jucor added a commit that referenced this pull request Jul 6, 2026
… + purge tool

Implements the capture half of Stack 2 / P6 (docs/STORAGE_V2_DESIGN.md §4.2
entity 2, §4.4): reproducibility begins with recording EXACTLY what the
pipeline read. The read seam (--input-source, P6b) follows.

- delphi_storage/inputs.py — capture_run_inputs(store, job_id, zid, rid):
  writes the six snapshot kinds as run_inputs items (codec envelopes,
  zstd-compressed votes) and returns per-kind fingerprints (sha256 of the
  canonical uncompressed payload, row_count, max vote created — the P7
  manifest inputs). Key fidelity decisions, pinned by tests:
  - votes = the RAW stream stage 1 consumes: ORDER BY created, raw PG signs
    (the production math path never flips — fetch_votes()'s flip is dead
    code), superseded votes included, order preserved (KMeans init depends
    on vote-encounter order, INVESTIGATION_K_DIVERGENCE.md).
  - The vote SQL is shared BY CONSTRUCTION: run_math_pipeline.py now imports
    VOTES_COUNT_SQL / VOTES_BATCH_SQL from delphi_storage.inputs (strings
    unchanged; golden suite + the e2e SQL pins stay green).
  - comments/participants captured in FULL, including moderated-out rows
    (mod = -1) and banned participants — filtering is pipeline behavior,
    not snapshot behavior.
  - clojure_math_main captured for ALL math_env rows (501 reads env-less
    latest, 801 filters MATH_ENV with a different default — snapshotting
    every env keeps both replayable).
  - derive_votes_latest_unique() reproduces PG's RULE-maintained
    votes_latest_unique from the stream (last vote per (pid, tid) in stream
    order) — tested against a seeded PG table mimicking the RULE.
- delphi_storage/purge.py — purge_job(): deletes every generic-entity
  partition for a job (the §9 GDPR path for snapshot copies).
- run_delphi.py — --snapshot-inputs flag (or DELPHI_SNAPSHOT_INPUTS=1):
  captures before any stage runs, aborts the run on capture failure
  (a run without recorded inputs defeats the point when enabled).
  Off by default until P7's DELPHI_WRITE_MODE subsumes it.

Tests (TDD; tests/test_input_snapshots.py, RED first): 16 tests — raw
stream order/signs, compression, fingerprints, derivation-vs-PG-RULE,
full-row comments/participants, all-env math_main, SQL-parity-by-import,
purge, and the run_delphi hook (flag, env, off-by-default). PG-backed tests
use a seeded scratch database (skip-locally / fail-in-CI convention).

Full suite: 429 passed, 41 skipped, 58 xfailed (5 pre-existing
DynamoDB-unavailable errors unchanged); golden snapshots ran and passed —
math outputs untouched.

Stack: P1 #2597, P2 #2598, P3 #2599, P4 #2600, P5 #2601, P6a this commit.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@jucor jucor force-pushed the jc/delphi-storage-v2-p4 branch from 5a5e0d4 to 5f9fbd5 Compare July 6, 2026 18:48
@jucor jucor force-pushed the jc/delphi-storage-v2-p4 branch from 5f9fbd5 to efc507b Compare July 6, 2026 22:52
jucor added a commit that referenced this pull request Jul 6, 2026
… + purge tool

Implements the capture half of Stack 2 / P6 (docs/STORAGE_V2_DESIGN.md §4.2
entity 2, §4.4): reproducibility begins with recording EXACTLY what the
pipeline read. The read seam (--input-source, P6b) follows.

- delphi_storage/inputs.py — capture_run_inputs(store, job_id, zid, rid):
  writes the six snapshot kinds as run_inputs items (codec envelopes,
  zstd-compressed votes) and returns per-kind fingerprints (sha256 of the
  canonical uncompressed payload, row_count, max vote created — the P7
  manifest inputs). Key fidelity decisions, pinned by tests:
  - votes = the RAW stream stage 1 consumes: ORDER BY created, raw PG signs
    (the production math path never flips — fetch_votes()'s flip is dead
    code), superseded votes included, order preserved (KMeans init depends
    on vote-encounter order, INVESTIGATION_K_DIVERGENCE.md).
  - The vote SQL is shared BY CONSTRUCTION: run_math_pipeline.py now imports
    VOTES_COUNT_SQL / VOTES_BATCH_SQL from delphi_storage.inputs (strings
    unchanged; golden suite + the e2e SQL pins stay green).
  - comments/participants captured in FULL, including moderated-out rows
    (mod = -1) and banned participants — filtering is pipeline behavior,
    not snapshot behavior.
  - clojure_math_main captured for ALL math_env rows (501 reads env-less
    latest, 801 filters MATH_ENV with a different default — snapshotting
    every env keeps both replayable).
  - derive_votes_latest_unique() reproduces PG's RULE-maintained
    votes_latest_unique from the stream (last vote per (pid, tid) in stream
    order) — tested against a seeded PG table mimicking the RULE.
- delphi_storage/purge.py — purge_job(): deletes every generic-entity
  partition for a job (the §9 GDPR path for snapshot copies).
- run_delphi.py — --snapshot-inputs flag (or DELPHI_SNAPSHOT_INPUTS=1):
  captures before any stage runs, aborts the run on capture failure
  (a run without recorded inputs defeats the point when enabled).
  Off by default until P7's DELPHI_WRITE_MODE subsumes it.

Tests (TDD; tests/test_input_snapshots.py, RED first): 16 tests — raw
stream order/signs, compression, fingerprints, derivation-vs-PG-RULE,
full-row comments/participants, all-env math_main, SQL-parity-by-import,
purge, and the run_delphi hook (flag, env, off-by-default). PG-backed tests
use a seeded scratch database (skip-locally / fail-in-CI convention).

Full suite: 429 passed, 41 skipped, 58 xfailed (5 pre-existing
DynamoDB-unavailable errors unchanged); golden snapshots ran and passed —
math outputs untouched.

Stack: P1 #2597, P2 #2598, P3 #2599, P4 #2600, P5 #2601, P6a this commit.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@jucor jucor requested a review from Copilot July 6, 2026 23:04

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Pull request overview

Adds deployable DDL artifacts for Delphi Storage V2 (PostgreSQL migration + DynamoDB table creation) and verifies they stay in lockstep with the backend-defined schema via sync + conformance tests, with CI wiring to run those tests in the existing Docker-based pipeline.

Changes:

  • Add PostgreSQL migration 000019 to create the delphi schema and its six V2 entities + indexes.
  • Extend delphi/create_dynamodb_tables.py to always create the Delphi2_* DynamoDB tables (with an inlined schema copy, drift-checked by tests).
  • Add DDL drift + deployed-artifact conformance tests, and update CI/docker-compose test env to support SQLAlchemy-safe Postgres URLs and migration staging.

Reviewed changes

Copilot reviewed 5 out of 5 changed files in this pull request and generated 3 comments.

Show a summary per file
File Description
server/postgres/migrations/000019_create_delphi_storage.sql New migration creating the V2 delphi schema tables and indexes.
delphi/create_dynamodb_tables.py Adds Delphi2 table schemas + creation helper and wires it into the standard table provisioning flow.
delphi/tests/test_delphi_storage_ddl.py New tests to enforce DDL drift-sync and validate deployed DDL artifacts via conformance runs.
docker-compose.test.yml Passes DELPHI_STORAGE_PG_URL/DATABASE_URL into the Delphi test container for PG-backend tests.
.github/workflows/python-ci.yml Derives DELPHI_STORAGE_PG_URL in CI and stages server migrations into the Delphi test container.

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Comment on lines +37 to +38
def _normalize_sql(sql: str) -> str:
return re.sub(r"\s+", " ", sql).strip().lower()
Comment on lines +136 to +137
store = PostgresDelphiStore(url=scratch_url, schema="delphi")
try:
Comment on lines +184 to +186
store = DynamoDelphiStore(
table_prefix="Delphi2_", endpoint_url=endpoint, region="us-east-1"
)
… PG migration 000019)

Implements Stack 1 / P4 of docs/STORAGE_V2_DESIGN.md: the deployment
artifacts for the V2 schema, pinned to the backend definitions.

- create_dynamodb_tables.py: DELPHI2_TABLE_SCHEMAS + create_delphi2_tables()
  wired into create_tables() (always created, like the job queue). The
  schemas are an INLINED copy because the script runs standalone in the
  dynamodb-init container (bare python + boto3, cannot import
  delphi_storage); tests/test_delphi_storage_ddl.py fails if the copy drifts
  from delphi_storage.backends.dynamodb.table_schemas("Delphi2_").
- server/postgres/migrations/000019_create_delphi_storage.sql: schema
  `delphi` with runs / latest / run_inputs / artifacts / topic_moderation /
  collective_statements, mirroring
  delphi_storage.backends.postgres.schema_ddl("delphi") statement for
  statement (drift-tested the same way).
- tests/test_delphi_storage_ddl.py proves the DEPLOYED artifacts (not the
  ensure_* test helpers) yield conformant stores: the migration applied by
  raw SQL to a scratch database passes the full conformance suite with
  ensure_schema off, and script-created Delphi2_* tables pass it with
  ensure_tables off. Service-gated tests follow the skip-locally /
  fail-in-GitHub-Actions convention.
- CI wiring (.github/workflows/python-ci.yml, docker-compose.test.yml) so the
  fail-in-GHA tests above actually run instead of erroring: the delphi `test`
  job now (a) stages server/postgres/migrations at /server/postgres/migrations
  inside the container — only delphi/ is baked into the image, but the
  migration-sync tests resolve the file at parents[2]/server/... which is
  /server/... from /app/tests; and (b) provides DELPHI_STORAGE_PG_URL with the
  postgresql:// scheme (SQLAlchemy 2.0 rejects the legacy postgres:// alias
  that DATABASE_URL carries, which otherwise raised NoSuchModuleError at
  engine creation), derived from the committed DATABASE_URL so credentials
  stay single-sourced. Without this the whole delphi test job failed at
  collection first (delphi_storage not on the image — fixed in P2) and then on
  these PG/DDL tests.

Tests: 406 passed, 30 skipped, 58 xfailed (5 pre-existing
DynamoDB-unavailable errors unchanged); with DynamoDB local + dockerized PG
all 6 DDL tests pass.

Stack: P1 #2597, P2 #2598, P3 #2599, P4 this commit. Completes Stack 1
(Foundation); Stack 2 (provenance plumbing, P5-P8) follows.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
@jucor jucor force-pushed the jc/delphi-storage-v2-p3 branch from a8ff600 to 9ff55da Compare July 10, 2026 11:40
@jucor jucor force-pushed the jc/delphi-storage-v2-p4 branch from 68aa10e to 926e37b Compare July 10, 2026 11:40
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Delphi Coverage Report

File Stmts Miss Cover
init.py 2 0 100%
benchmarks/bench_pca.py 128 107 16%
benchmarks/bench_repness.py 81 65 20%
benchmarks/bench_update_votes.py 38 28 26%
benchmarks/benchmark_utils.py 34 24 29%
components/init.py 1 0 100%
components/config.py 165 133 19%
conversation/init.py 2 0 100%
conversation/conversation.py 1108 259 77%
conversation/manager.py 131 42 68%
database/init.py 1 0 100%
database/dynamodb.py 395 189 52%
database/postgres.py 306 206 33%
pca_kmeans_rep/init.py 5 0 100%
pca_kmeans_rep/clusters.py 257 21 92%
pca_kmeans_rep/corr.py 98 17 83%
pca_kmeans_rep/pca.py 135 18 87%
pca_kmeans_rep/repness.py 208 9 96%
regression/init.py 4 0 100%
regression/clojure_comparer.py 188 20 89%
regression/comparer.py 887 720 19%
regression/datasets.py 135 27 80%
regression/recorder.py 36 27 25%
regression/utils.py 138 94 32%
run_math_pipeline.py 261 113 57%
umap_narrative/500_generate_embedding_umap_cluster.py 210 109 48%
umap_narrative/501_calculate_comment_extremity.py 112 53 53%
umap_narrative/502_calculate_priorities.py 135 135 0%
umap_narrative/700_datamapplot_for_layer.py 502 502 0%
umap_narrative/701_static_datamapplot_for_layer.py 310 310 0%
umap_narrative/702_consensus_divisive_datamapplot.py 432 432 0%
umap_narrative/801_narrative_report_batch.py 785 785 0%
umap_narrative/802_process_batch_results.py 268 268 0%
umap_narrative/803_check_batch_status.py 183 183 0%
umap_narrative/llm_factory_constructor/init.py 2 2 0%
umap_narrative/llm_factory_constructor/model_provider.py 192 192 0%
umap_narrative/polismath_commentgraph/init.py 1 0 100%
umap_narrative/polismath_commentgraph/cli.py 270 270 0%
umap_narrative/polismath_commentgraph/core/init.py 3 3 0%
umap_narrative/polismath_commentgraph/core/clustering.py 108 108 0%
umap_narrative/polismath_commentgraph/core/embedding.py 104 104 0%
umap_narrative/polismath_commentgraph/lambda_handler.py 219 219 0%
umap_narrative/polismath_commentgraph/schemas/init.py 2 0 100%
umap_narrative/polismath_commentgraph/schemas/dynamo_models.py 160 9 94%
umap_narrative/polismath_commentgraph/tests/conftest.py 17 17 0%
umap_narrative/polismath_commentgraph/tests/test_clustering.py 74 74 0%
umap_narrative/polismath_commentgraph/tests/test_embedding.py 55 55 0%
umap_narrative/polismath_commentgraph/tests/test_storage.py 87 87 0%
umap_narrative/polismath_commentgraph/utils/init.py 3 0 100%
umap_narrative/polismath_commentgraph/utils/converter.py 283 237 16%
umap_narrative/polismath_commentgraph/utils/group_data.py 354 336 5%
umap_narrative/polismath_commentgraph/utils/storage.py 584 518 11%
umap_narrative/reset_conversation.py 159 50 69%
umap_narrative/run_pipeline.py 453 312 31%
utils/general.py 62 41 34%
Total 10873 7530 31%

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2 participants