Skip to content

Comments

Add a sub-package "time series" into PlantCV#587

Open
DannieSheng wants to merge 286 commits intovisualize_show_instancesfrom
add_time_series_sub_package
Open

Add a sub-package "time series" into PlantCV#587
DannieSheng wants to merge 286 commits intovisualize_show_instancesfrom
add_time_series_sub_package

Conversation

@DannieSheng
Copy link
Contributor

@DannieSheng DannieSheng commented Jun 17, 2020

Describe your changes
A brand new sub-package called "time series" was added to PlantCV.
This package is different from most functions already in PlantCV, it deals not with single images, but a series of images. Related documentation, tests, and test data are also updated.

class InstanceTimeSeriesLinking
(methods are called by the methods inside the parentheses )

(checklist for whether have tests covered)

class methods:

  • save_linked_series
  • import_linked_series
  • link_t (link)
  • link
  • update_ti
  • link_dist_t (link_dist)
  • link_dist

static methods:

  • get_link(_update_ti, link_t,link_dist_t)
  • compute_overlaps_weights(link_t , _update_ti)
  • get_sorted_uids(link, link_dist)
  • get_uids_from_ti(_update_ti)
  • get_emerg_disap_info(get_ti,_update_ti)
  • get_ti(link,link_dist)
  • get_li_from_ti
  • area_tracking_report(link,update_ti)
  • visualize
  • _update_ti(update_ti)
  • compute_dist_weights (link_dist_t)

Type of update
Is this a:

  • New feature or feature enhancement
  • Update to documentation
  • Work in progress

@DannieSheng DannieSheng added documentation Documentation issues or features new feature New feature ideas and solutions work in progress Mark work in progress labels Jun 17, 2020
@DannieSheng DannieSheng added this to the PlantCV Release v3.0 milestone Jun 17, 2020
for the newly added time_lapse_video function into visualize subpackage
for the newly added time_lapse_video into visualize subpackage
for the newly added time_lapse_video into visualize subpackage
Update tests for visualize/time_lapse_video
@nfahlgren nfahlgren removed this from the PlantCV v4.x milestone Nov 21, 2025
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

documentation Documentation issues or features new feature New feature ideas and solutions work in progress Mark work in progress

Projects

None yet

Development

Successfully merging this pull request may close these issues.

3 participants