Refactor BioMesh Domain to Version 2.0 Specifications#68
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- Update `VascularEdge` to use `flow_capacity` to support graph edge weights - Implement `OsteoMeshNetwork` utilizing `Eigen/Dense` to calculate Graph Laplacian and Fiedler value - Introduce `simulate_vaso_occlusive_loop` to dynamically degrade network connections over time - Validate the graph recovery through tests showing MetaboJointMatrix triggering network repair and restoring the Fiedler value Co-authored-by: google-labs-jules[bot] <161369871+google-labs-jules[bot]@users.noreply.github.com>
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This PR implements the Graph-Theoretic Formalization of the BioMesh Domain per the v2.0 specifications. The structural connectivity of the network is now strictly tracked via its Laplacian matrix, computing the Fiedler value in real-time. This provides the mathematical basis for simulating graceful network degradation (vaso-occlusive crises) and demonstrating robust recovery after the payload initiates edge restoration.
PR created automatically by Jules for task 2853933717657633433 started by @dfeen87