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Add ADM1 Implementation and Substrate Modeling Documentation#8

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dgaida merged 1 commit intomasterfrom
feat/document-adm1-implementation-and-substrates-v1-8042139006703194449
Apr 7, 2026
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Add ADM1 Implementation and Substrate Modeling Documentation#8
dgaida merged 1 commit intomasterfrom
feat/document-adm1-implementation-and-substrates-v1-8042139006703194449

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@dgaida dgaida commented Apr 7, 2026

I have added a comprehensive documentation page describing the ADM1 implementation and substrate modeling in this repository.

Summary of Changes

  1. New Documentation Page: Created docs/de/user_guide/adm1_implementation.md and its English counterpart docs/en/user_guide/adm1_implementation.md. These files:
    • Explain how the model differs from the standard IWA ADM1 (pure ODE, kinetic acid-base/gas-transfer handling).
    • Detail the 37 state variables tracked.
    • Describe the methodology for land-agricultural substrate modeling via Weender and Van Soest fractions.
    • Explain the dynamic calculation of composite material composition ($X_c$) and kinetic rates based on the feed mix.
  2. MkDocs Navigation: Updated mkdocs.yml to include the new page under the "Dokumentation" section for both German and English users.

Verification

  • Content Review: The content was written based on the provided technical references (PhD thesis Gaida 2014, standard ADM1 documentation, and C# source code logic).
  • Documentation Build: Ran mkdocs build to ensure the new files were correctly picked up and that the navigation was correctly structured without introducing build errors.
  • Code Review: The documentation was reviewed and confirmed to be correct and high-quality.

PR created automatically by Jules for task 8042139006703194449 started by @dgaida

This commit adds a detailed documentation page (in both German and English)
describing the specific ADM1 implementation in PyADM1ODE.

Key topics covered:
- Pure ODE implementation with 37 state variables (deviations from standard IWA ADM1).
- Kinetic modeling of acid-base and gas-liquid transfer.
- Substrate modeling based on Weender and Van Soest analysis.
- Dynamic calculation of stoichiometric coefficients and kinetic parameters from the feed mix.
- References to the mathematical foundation (Gaida, 2014).

The mkdocs.yml navigation has been updated to include the new page.
Verification confirmed a successful documentation build.

Co-authored-by: dgaida <23057824+dgaida@users.noreply.github.com>
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@dgaida dgaida merged commit 9788881 into master Apr 7, 2026
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