Chore/upgrade go version

.github/workflows/ci.yaml

@@ -12,7 +12,7 @@ jobs:
       - name: set up golang
         uses: actions/setup-go@v5
         with:
-          go-version: 1.22
+          go-version: 1.25
       - name: unit test
         run: go test -parallel 4 -covermode=atomic -coverprofile=profile.cov -v ./...
       - name: upload coverage to codecov

.github/workflows/create-pull-request.yml

@@ -13,7 +13,7 @@ jobs:
         uses: actions/checkout@v4
       - name: Create Pull Request
         env: 
-          GH_TOKEN: ${{ github.token }}
+          GH_TOKEN: ${{ secrets.REPO_ACCESS_TOKEN }}
         run: |
           # Get current branch name
           branch_name=$(git symbolic-ref --short HEAD)

.github/workflows/lint.yaml

@@ -1,16 +1,12 @@
 name: Lint Golang code
-on: [pull_request]
+on:
+  pull_request:
+    branches-ignore:
+      - master
 jobs:
-  lint:
-    runs-on: ubuntu-latest
-    steps:
-      - name: check out code
-        uses: actions/checkout@v4
-      - uses: actions/setup-go@v5
-        with:
-          go-version: 1.22
-          cache: false
-      - name: run linter
-        uses: golangci/golangci-lint-action@v6
-        with:
-          version: v1.58.2
+  call-lint:
+    uses: dictyBase/workflows/.github/workflows/golang-lint.yaml@develop
+    with:
+      repository: ${{ github.repository }}
+      ref: ${{ github.event.pull_request.head.sha }}
+      version: v2.8.0-alpine

.github/workflows/release.yaml

@@ -12,7 +12,7 @@ jobs:
       - name: setup golang
         uses: actions/setup-go@v5
         with:
-          go-version: 1.22
+          go-version: 1.25
       - name: generate and publish binary 
         if: startsWith(github.ref, 'refs/tags/')
         uses: goreleaser/goreleaser-action@v6

.github/workflows/testcov.yaml

@@ -7,7 +7,7 @@ jobs:
       - name: set up golang
         uses: actions/setup-go@v5
         with:
-          go-version: 1.22
+          go-version: 1.25
       - name: check out code
         uses: actions/checkout@v4
       - name: unit test

.golangci.yml

@@ -1,61 +1,74 @@
-linters-settings:
-   lll:
-      line-length: 2380
-   funlen:
-      lines: 75
-   errcheck:
-      ignore : ""
+version: "2"
+run:
+  allow-parallel-runners: true
 linters:
-  # inverted configuration with `enable-all` and `disable` is not scalable during updates of golangci-lint
-  disable-all: true
+  default: none
   enable:
     - asciicheck
+    - bidichk
     - bodyclose
-    - cyclop 
+    - copyloopvar
+    - cyclop
     - decorder
     - dogsled
-    - dupl
-    - errcheck
-    - errname
     - funlen
-    - gochecknoinits
+    - funcorder
     - goconst
-    - gocritic
     - gocyclo
-    - godot
-    - gofmt
-    - goimports
     - gosec
-    - gosimple
     - govet
     - gocognit
+    - godoclint
+    - intrange
     - ineffassign
+    - importas
+    - inamedparam
+    - interfacebloat
     - lll
+    - loggercheck
     - maintidx
     - misspell
+    - mnd
+    - modernize
     - nakedret
     - nestif
-    - nilerr
-    - nolintlint
-    - prealloc
-    - paralleltest
+    - protogetter
     - revive
-    - rowserrcheck
+    - recvcheck
     - staticcheck
-    - stylecheck
-    - typecheck
+    - testifylint
+    - modernize
     - unconvert
-    - thelper
-    - tparallel
+    - usestdlibvars
     - unparam
     - unused
-    - unconvert
-    - unparam
-    - varnamelen
-    - wastedassign
     - whitespace
-    - wrapcheck
-
-  # don't enable:
-  # - godox - maligned,prealloc
-  # - gochecknoglobals
+    - wsl_v5
+  settings:
+    funlen:
+      lines: 120
+      statements: 50
+  exclusions:
+    generated: lax
+    presets:
+      - comments
+      - common-false-positives
+      - legacy
+      - std-error-handling
+    paths:
+      - third_party$
+      - builtin$
+      - examples$
+      - internal/baserow/
+      - internal/k8s/
+formatters:
+  enable:
+    - gofumpt
+    - goimports
+    - golines
+  exclusions:
+    generated: lax
+    paths:
+      - third_party$
+      - builtin$
+      - examples$

AGENTS.md

@@ -0,0 +1,22 @@
+# AGENTS.md
+
+
+## Essential Commands
+
+```bash
+# Test
+gotestsum --format pkgname-and-test-fails --format-hide-empty-pkg -- ./...
+
+# Test (verbose)
+gotestsum --format testdox --format-hide-empty-pkg -- ./...
+
+# Watch mode
+gotestsum --watch --format pkgname-and-test-fails --format-hide-empty-pkg -- ./...
+
+# Lint
+golangci-lint run ./...
+
+# Format
+golangci-lint fmt
+
+

build/package/Dockerfile

@@ -1,4 +1,4 @@
-FROM golang:1.22-bullseye AS builder
+FROM golang:1.25-trixie AS builder
 LABEL maintainer="Siddhartha Basu <siddhartha-basu@northwestern.edu>"
 ENV GOPROXY https://proxy.golang.org
 ENV GO111MODULE=on \

cmd/github-actions/main.go

@@ -39,6 +39,7 @@ func main() {
 			Value: "dictyBase",
 		},
 	}
+
 	app.Commands = []cli.Command{
 		cmd.IssueCommentCmds(),
 		cmd.CommentsCountByDateCmds(),

go.mod

@@ -1,6 +1,6 @@
 module github.com/dictyBase-docker/github-actions
 
-go 1.22
+go 1.25.0
 
 require (
 	github.com/Jeffail/gabs/v2 v2.7.0
@@ -10,45 +10,44 @@ require (
 	github.com/repeale/fp-go v0.11.1
 	github.com/sethvargo/go-githubactions v1.3.0
 	github.com/sirupsen/logrus v1.9.3
-	github.com/stretchr/testify v1.10.0
+	github.com/stretchr/testify v1.11.1
 	github.com/urfave/cli v1.22.16
-	golang.org/x/exp v0.0.0-20220613132600-b0d781184e0d
-	golang.org/x/oauth2 v0.26.0
-	golang.org/x/sync v0.11.0
-	golang.org/x/text v0.22.0
-	google.golang.org/api v0.219.0
+	golang.org/x/exp v0.0.0-20260508232706-74f9aab9d74a
+	golang.org/x/oauth2 v0.36.0
+	golang.org/x/sync v0.20.0
+	golang.org/x/text v0.37.0
+	google.golang.org/api v0.279.0
 )
 
 require (
-	cloud.google.com/go/auth v0.14.0 // indirect
-	cloud.google.com/go/auth/oauth2adapt v0.2.7 // indirect
-	cloud.google.com/go/compute/metadata v0.6.0 // indirect
+	cloud.google.com/go/auth v0.20.0 // indirect
+	cloud.google.com/go/auth/oauth2adapt v0.2.8 // indirect
+	cloud.google.com/go/compute/metadata v0.9.0 // indirect
+	github.com/cespare/xxhash/v2 v2.3.0 // indirect
 	github.com/cpuguy83/go-md2man/v2 v2.0.5 // indirect
 	github.com/davecgh/go-spew v1.1.1 // indirect
 	github.com/felixge/httpsnoop v1.0.4 // indirect
 	github.com/go-ini/ini v1.66.6 // indirect
-	github.com/go-logr/logr v1.4.2 // indirect
+	github.com/go-logr/logr v1.4.3 // indirect
 	github.com/go-logr/stdr v1.2.2 // indirect
 	github.com/google/go-querystring v1.1.0 // indirect
 	github.com/google/s2a-go v0.1.9 // indirect
 	github.com/google/uuid v1.6.0 // indirect
-	github.com/googleapis/enterprise-certificate-proxy v0.3.4 // indirect
-	github.com/googleapis/gax-go/v2 v2.14.1 // indirect
-	github.com/kr/text v0.2.0 // indirect
+	github.com/googleapis/enterprise-certificate-proxy v0.3.15 // indirect
+	github.com/googleapis/gax-go/v2 v2.22.0 // indirect
 	github.com/mitchellh/go-homedir v1.1.0 // indirect
-	github.com/niemeyer/pretty v0.0.0-20200227124842-a10e7caefd8e // indirect
 	github.com/pmezard/go-difflib v1.0.0 // indirect
 	github.com/russross/blackfriday/v2 v2.1.0 // indirect
-	go.opentelemetry.io/contrib/instrumentation/net/http/otelhttp v0.54.0 // indirect
-	go.opentelemetry.io/otel v1.32.0 // indirect
-	go.opentelemetry.io/otel/metric v1.32.0 // indirect
-	go.opentelemetry.io/otel/trace v1.32.0 // indirect
-	golang.org/x/crypto v0.32.0 // indirect
-	golang.org/x/net v0.34.0 // indirect
-	golang.org/x/sys v0.29.0 // indirect
-	google.golang.org/genproto/googleapis/rpc v0.0.0-20250124145028-65684f501c47 // indirect
-	google.golang.org/grpc v1.70.0 // indirect
-	google.golang.org/protobuf v1.36.4 // indirect
-	gopkg.in/check.v1 v1.0.0-20200227125254-8fa46927fb4f // indirect
+	go.opentelemetry.io/auto/sdk v1.2.1 // indirect
+	go.opentelemetry.io/contrib/instrumentation/net/http/otelhttp v0.67.0 // indirect
+	go.opentelemetry.io/otel v1.43.0 // indirect
+	go.opentelemetry.io/otel/metric v1.43.0 // indirect
+	go.opentelemetry.io/otel/trace v1.43.0 // indirect
+	golang.org/x/crypto v0.51.0 // indirect
+	golang.org/x/net v0.54.0 // indirect
+	golang.org/x/sys v0.44.0 // indirect
+	google.golang.org/genproto/googleapis/rpc v0.0.0-20260511170946-3700d4141b60 // indirect
+	google.golang.org/grpc v1.81.1 // indirect
+	google.golang.org/protobuf v1.36.11 // indirect
 	gopkg.in/yaml.v3 v3.0.1 // indirect
 )