OOPS analysis of two doses of sodium arsenite treatment (please feel free to upload a corrected version of figure!!)
| Folder | Contents |
|---|---|
| raw | Raw data files from Rayner, sample list and reannotated files from Tom's Python script |
| notebooks | Contains *.Rmd files with full code including functions as well as *.pdf files that are code and output without full list of functions used |
| results | Contains TSV and CSV files containing results of differential expression analysis. Contail R objects (RDS files) that are data objects that are used in the analysis |
| plots | Contains figures output from the code - hopefully the titles are self-explanatory |
| shared_files | Annotation files used in the analysis |
| U2OS-Sodium-Arsenite-Experimental-Setup.png | Experimental diagram |
| README.md | This file |
Thanks!
Manasa