fix: add missing GoGraph component and migrations

.gitignore

@@ -31,3 +31,7 @@ logs/pids/
 
 CLAUDE.md
 .claude/
+
+# Local data
+static/
+storage/

alembic/versions/1f0ac8aa38a4_add_evaluation_set.py

@@ -0,0 +1,61 @@
+"""add evaluation_set
+
+Revision ID: 1f0ac8aa38a4
+Revises: a7b8c9d0e1f2
+Create Date: 2026-03-12 22:13:05.918342
+
+"""
+from typing import Sequence, Union
+
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision: str = '1f0ac8aa38a4'
+down_revision: Union[str, Sequence[str], None] = 'a7b8c9d0e1f2'
+branch_labels: Union[str, Sequence[str], None] = None
+depends_on: Union[str, Sequence[str], None] = None
+
+
+def upgrade() -> None:
+    """Upgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.create_table('evaluation_set',
+    sa.Column('id', sa.UUID(), nullable=False),
+    sa.Column('old_annotation_set_id', sa.UUID(), nullable=False),
+    sa.Column('new_annotation_set_id', sa.UUID(), nullable=False),
+    sa.Column('job_id', sa.UUID(), nullable=True),
+    sa.Column('created_at', sa.DateTime(timezone=True), server_default=sa.text('now()'), nullable=False),
+    sa.Column('stats', postgresql.JSONB(astext_type=sa.Text()), nullable=False),
+    sa.ForeignKeyConstraint(['job_id'], ['job.id'], ondelete='SET NULL'),
+    sa.ForeignKeyConstraint(['new_annotation_set_id'], ['annotation_set.id'], ondelete='RESTRICT'),
+    sa.ForeignKeyConstraint(['old_annotation_set_id'], ['annotation_set.id'], ondelete='RESTRICT'),
+    sa.PrimaryKeyConstraint('id')
+    )
+    op.create_index(op.f('ix_evaluation_set_job_id'), 'evaluation_set', ['job_id'], unique=False)
+    op.create_index(op.f('ix_evaluation_set_new_annotation_set_id'), 'evaluation_set', ['new_annotation_set_id'], unique=False)
+    op.create_index(op.f('ix_evaluation_set_old_annotation_set_id'), 'evaluation_set', ['old_annotation_set_id'], unique=False)
+    op.drop_index(op.f('ix_go_term_relationship_child'), table_name='go_term_relationship')
+    op.drop_index(op.f('ix_go_term_relationship_parent'), table_name='go_term_relationship')
+    op.drop_index(op.f('ix_go_term_relationship_snapshot'), table_name='go_term_relationship')
+    op.create_index(op.f('ix_go_term_relationship_child_go_term_id'), 'go_term_relationship', ['child_go_term_id'], unique=False)
+    op.create_index(op.f('ix_go_term_relationship_ontology_snapshot_id'), 'go_term_relationship', ['ontology_snapshot_id'], unique=False)
+    op.create_index(op.f('ix_go_term_relationship_parent_go_term_id'), 'go_term_relationship', ['parent_go_term_id'], unique=False)
+    # ### end Alembic commands ###
+
+
+def downgrade() -> None:
+    """Downgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_index(op.f('ix_go_term_relationship_parent_go_term_id'), table_name='go_term_relationship')
+    op.drop_index(op.f('ix_go_term_relationship_ontology_snapshot_id'), table_name='go_term_relationship')
+    op.drop_index(op.f('ix_go_term_relationship_child_go_term_id'), table_name='go_term_relationship')
+    op.create_index(op.f('ix_go_term_relationship_snapshot'), 'go_term_relationship', ['ontology_snapshot_id'], unique=False)
+    op.create_index(op.f('ix_go_term_relationship_parent'), 'go_term_relationship', ['parent_go_term_id'], unique=False)
+    op.create_index(op.f('ix_go_term_relationship_child'), 'go_term_relationship', ['child_go_term_id'], unique=False)
+    op.drop_index(op.f('ix_evaluation_set_old_annotation_set_id'), table_name='evaluation_set')
+    op.drop_index(op.f('ix_evaluation_set_new_annotation_set_id'), table_name='evaluation_set')
+    op.drop_index(op.f('ix_evaluation_set_job_id'), table_name='evaluation_set')
+    op.drop_table('evaluation_set')
+    # ### end Alembic commands ###

alembic/versions/47de89cf6fec_add_evaluation_result.py

@@ -0,0 +1,49 @@
+"""add evaluation_result
+
+Revision ID: 47de89cf6fec
+Revises: 1f0ac8aa38a4
+Create Date: 2026-03-12 22:27:34.042479
+
+"""
+from typing import Sequence, Union
+
+from alembic import op
+import sqlalchemy as sa
+from sqlalchemy.dialects import postgresql
+
+# revision identifiers, used by Alembic.
+revision: str = '47de89cf6fec'
+down_revision: Union[str, Sequence[str], None] = '1f0ac8aa38a4'
+branch_labels: Union[str, Sequence[str], None] = None
+depends_on: Union[str, Sequence[str], None] = None
+
+
+def upgrade() -> None:
+    """Upgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.create_table('evaluation_result',
+    sa.Column('id', sa.UUID(), nullable=False),
+    sa.Column('evaluation_set_id', sa.UUID(), nullable=False),
+    sa.Column('prediction_set_id', sa.UUID(), nullable=False),
+    sa.Column('job_id', sa.UUID(), nullable=True),
+    sa.Column('created_at', sa.DateTime(timezone=True), server_default=sa.text('now()'), nullable=False),
+    sa.Column('results', postgresql.JSONB(astext_type=sa.Text()), nullable=False),
+    sa.ForeignKeyConstraint(['evaluation_set_id'], ['evaluation_set.id'], ondelete='CASCADE'),
+    sa.ForeignKeyConstraint(['job_id'], ['job.id'], ondelete='SET NULL'),
+    sa.ForeignKeyConstraint(['prediction_set_id'], ['prediction_set.id'], ondelete='CASCADE'),
+    sa.PrimaryKeyConstraint('id')
+    )
+    op.create_index(op.f('ix_evaluation_result_evaluation_set_id'), 'evaluation_result', ['evaluation_set_id'], unique=False)
+    op.create_index(op.f('ix_evaluation_result_job_id'), 'evaluation_result', ['job_id'], unique=False)
+    op.create_index(op.f('ix_evaluation_result_prediction_set_id'), 'evaluation_result', ['prediction_set_id'], unique=False)
+    # ### end Alembic commands ###
+
+
+def downgrade() -> None:
+    """Downgrade schema."""
+    # ### commands auto generated by Alembic - please adjust! ###
+    op.drop_index(op.f('ix_evaluation_result_prediction_set_id'), table_name='evaluation_result')
+    op.drop_index(op.f('ix_evaluation_result_job_id'), table_name='evaluation_result')
+    op.drop_index(op.f('ix_evaluation_result_evaluation_set_id'), table_name='evaluation_result')
+    op.drop_table('evaluation_result')
+    # ### end Alembic commands ###