Uniprot API Usage

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Fatma Sena Arpinar edited this page Dec 3, 2025 · 5 revisions

Protein Lookup

URL: https://rest.uniprot.org/uniprotkb/<uniprot_id>.json
Method: GET
Documentation is here

Protein history (to get entry version for the given sequence version)

URL: https://rest.uniprot.org/unisave/<uniprot_id>
Method: GET
Response is JSON with a list of versions with "sequenceVersion" to match the given version and "entryVersion" to retrieve the sequence using "protein sequence by version" described below
Documentation is here

Protein Sequence by version

URL: https://rest.uniprot.org/uniprotkb/<uniprot_id>.fasta?version=<version>
Method: GET
Response: FASTA sequence
Documentation is here

Projects

GlyTableMaker

UniprotUtil
Web Services:
- api/util/getproteinfromuniprot/{uniprotid}
- api/data/addglycoproteinfromfile
- api/data/addglycoprotein