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1. SahakyanLab/iMotif_dev SahakyanLab/iMotif_dev Public

   Data and scripts for iMotif stability predictions in a restricted C/T space of possible sequences.

   R

2. SahakyanLab/ROptimus SahakyanLab/ROptimus Public

   ROptimus: a parallel general purpose adaptive optimisation engine

   R 4

3. single-cell-preprocess single-cell-preprocess Public

   A Snakemake pipeline for processing 10X single-cell data

   R

4. ml-tabular ml-tabular Public

   ML workflow for tabular data

   Python

5. feature-flow feature-flow Public

   A Snakemake pipeline for analyzing high-dimensional feature tables: preprocessing, statistical testing, and optional grouping into interpretable modules.

   R

6. instance-to-sample-prediction instance-to-sample-prediction Public

   Multiple-instance learning workflow for predicting sample-level labels from instance-level feature or embedding tables, with attention-based instance ranking and downstream analysis for interpretin…

   Python