feat: add manual-alignment export, refinement, and global-transform tools#104
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PR #104 — Manual Alignment Tooling
Adds CLIs for exporting previews for manual alignment review, refining manual transforms against image-based registration, and estimating a pooled global 3D transform.
New scripts
scripts/linum_export_manual_align.py— export paired XY/XZ/YZ previews for manual alignment reviewscripts/linum_refine_manual_transforms.py— refine manual 2D rigid transforms via image registrationscripts/tests/test_refine_manual_transforms.pyscripts/linum_estimate_global_transform.py— pooled global 3D transform estimationDependencies