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Merged
llbbl merged 1 commit into from
Mar 11, 2026
Merged

chore(deps): upgrade biome to v2.4.6 and @types/bun to 1.3.10 #1

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65 changes: 39 additions & 26 deletions .beads/.gitignore
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@@ -1,39 +1,52 @@
# SQLite databases
*.db
*.db?*
*.db-journal
*.db-wal
*.db-shm
# Dolt database (managed by Dolt, not git)
dolt/
dolt-access.lock

# Daemon runtime files
daemon.lock
daemon.log
daemon.pid
# Runtime files
bd.sock
bd.sock.startlock
sync-state.json
last-touched

# Local version tracking (prevents upgrade notification spam after git ops)
.local_version

# Legacy database files
db.sqlite
bd.db

# Worktree redirect file (contains relative path to main repo's .beads/)
# Must not be committed as paths would be wrong in other clones
redirect

# Merge artifacts (temporary files from 3-way merge)
beads.base.jsonl
beads.base.meta.json
beads.left.jsonl
beads.left.meta.json
beads.right.jsonl
beads.right.meta.json
# Sync state (local-only, per-machine)
# These files are machine-specific and should not be shared across clones
.sync.lock
export-state/

# Ephemeral store (SQLite - wisps/molecules, intentionally not versioned)
ephemeral.sqlite3
ephemeral.sqlite3-journal
ephemeral.sqlite3-wal
ephemeral.sqlite3-shm

# NOTE: Do NOT add negation patterns (e.g., !issues.jsonl) here.
# They would override fork protection in .git/info/exclude, allowing
# contributors to accidentally commit upstream issue databases.
# The JSONL files (issues.jsonl, interactions.jsonl) and config files
# are tracked by git by default since no pattern above ignores them.
# Dolt server management (auto-started by bd)
dolt-server.pid
dolt-server.log
dolt-server.lock
dolt-server.port
dolt-server.activity
dolt-monitor.pid

# Legacy files (from pre-Dolt versions)
*.db
*.db?*
*.db-journal
*.db-wal
*.db-shm
db.sqlite
bd.db
daemon.lock
daemon.log
daemon-*.log.gz
daemon.pid
# NOTE: Do NOT add negation patterns here.
# They would override fork protection in .git/info/exclude.
# Config files (metadata.json, config.yaml) are tracked by git by default
# since no pattern above ignores them.
42 changes: 38 additions & 4 deletions .beads/README.md
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Expand Up @@ -70,12 +70,46 @@ bd init
bd create "Try out Beads"
```

## Dolt Backend

Beads uses [Dolt](https://www.dolthub.com/) as its database engine. Dolt must be installed for beads to work.

```bash
# Install Dolt
brew install dolt
```

The `.beads/` directory contains:
- **Dolt database** (the `dolt/` directory)
- **`issues.jsonl`** — JSONL backup of all issues (portable, used for recovery)
- **`dolt-server.lock`** — PID file for the Dolt SQL server daemon

### Recovery / Re-importing Issues

If beads stops working (e.g., "no beads database found" after a fresh clone, Dolt reinstall, or corrupted state), re-import from the JSONL backup:

```bash
# Re-initialize and import all issues from JSONL backup
bd init --force --prefix <project-prefix> --from-jsonl

# For this project:
bd init --force --prefix uncov --from-jsonl
```

This reads `.beads/issues.jsonl` and rebuilds the Dolt database. The `--force` flag is required when `.beads/` already exists.

### Stale Daemon

If you see connection errors, the Dolt server daemon may have a stale PID. Check and kill it:

```bash
cat .beads/dolt-server.lock # Shows the PID
kill <pid> # Kill stale process
bd list # Will restart the daemon automatically
```

## Learn More

- **Documentation**: [github.com/steveyegge/beads/docs](https://github.com/steveyegge/beads/tree/main/docs)
- **Quick Start Guide**: Run `bd quickstart`
- **Examples**: [github.com/steveyegge/beads/examples](https://github.com/steveyegge/beads/tree/main/examples)

---

*Beads: Issue tracking that moves at the speed of thought* ⚡
13 changes: 13 additions & 0 deletions .beads/backup/backup_state.json
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{
"last_dolt_commit": "ce2k10ue6864cd9gc024iqh08r99nhv6",
"last_event_id": 0,
"timestamp": "2026-03-11T20:20:20.327917Z",
"counts": {
"issues": 47,
"events": 47,
"comments": 0,
"dependencies": 32,
"labels": 0,
"config": 11
}
}
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11 changes: 11 additions & 0 deletions .beads/backup/config.jsonl
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{"key":"auto_compact_enabled","value":"false"}
{"key":"compact_batch_size","value":"50"}
{"key":"compact_parallel_workers","value":"5"}
{"key":"compact_tier1_days","value":"30"}
{"key":"compact_tier1_dep_levels","value":"2"}
{"key":"compact_tier2_commits","value":"100"}
{"key":"compact_tier2_days","value":"90"}
{"key":"compact_tier2_dep_levels","value":"5"}
{"key":"compaction_enabled","value":"false"}
{"key":"issue_prefix","value":"uncov"}
{"key":"schema_version","value":"6"}
32 changes: 32 additions & 0 deletions .beads/backup/dependencies.jsonl
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{"created_at":"2026-02-03T02:56:18Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-kah","issue_id":"uncov-0lq","type":"blocks"}
{"created_at":"2026-02-03T02:56:18Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-kah","issue_id":"uncov-0ou","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-fn0","issue_id":"uncov-2bo","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-mv8","issue_id":"uncov-2bo","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ocy","issue_id":"uncov-2bo","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-s2m","issue_id":"uncov-2bo","type":"blocks"}
{"created_at":"2026-02-03T02:56:16Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-brm","issue_id":"uncov-38c","type":"blocks"}
{"created_at":"2026-02-03T02:56:16Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ocy","issue_id":"uncov-38c","type":"blocks"}
{"created_at":"2026-02-03T02:56:16Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-p0r","issue_id":"uncov-38c","type":"blocks"}
{"created_at":"2026-02-03T02:56:16Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-q77","issue_id":"uncov-38c","type":"blocks"}
{"created_at":"2026-02-03T02:56:18Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-38c","issue_id":"uncov-b90","type":"blocks"}
{"created_at":"2026-02-03T02:56:08Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-brm","type":"blocks"}
{"created_at":"2026-02-03T02:56:08Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ed6","issue_id":"uncov-brm","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-brm","issue_id":"uncov-e27","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-mv8","issue_id":"uncov-e27","type":"blocks"}
{"created_at":"2026-02-03T02:56:18Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ocy","issue_id":"uncov-e27","type":"blocks"}
{"created_at":"2026-02-03T02:56:17Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-p0r","issue_id":"uncov-e27","type":"blocks"}
{"created_at":"2026-02-03T02:56:07Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-ed6","type":"blocks"}
{"created_at":"2026-02-03T02:56:09Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-fn0","type":"blocks"}
{"created_at":"2026-02-03T02:56:09Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ed6","issue_id":"uncov-fn0","type":"blocks"}
{"created_at":"2026-02-03T02:56:18Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-b90","issue_id":"uncov-kah","type":"blocks"}
{"created_at":"2026-02-03T02:56:08Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-mv8","type":"blocks"}
{"created_at":"2026-02-03T02:56:09Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ed6","issue_id":"uncov-mv8","type":"blocks"}
{"created_at":"2026-02-03T02:56:07Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-ocy","type":"blocks"}
{"created_at":"2026-02-03T02:56:08Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-p0r","type":"blocks"}
{"created_at":"2026-02-03T02:56:08Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ed6","issue_id":"uncov-p0r","type":"blocks"}
{"created_at":"2026-02-03T02:56:08Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-qu3","issue_id":"uncov-p0r","type":"blocks"}
{"created_at":"2026-02-03T02:56:18Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-38c","issue_id":"uncov-p2k","type":"blocks"}
{"created_at":"2026-02-03T02:56:07Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-q77","type":"blocks"}
{"created_at":"2026-02-03T02:56:07Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-qu3","type":"blocks"}
{"created_at":"2026-02-03T02:56:09Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-3ky","issue_id":"uncov-s2m","type":"blocks"}
{"created_at":"2026-02-03T02:56:09Z","created_by":"Logan Lindquist Land","depends_on_id":"uncov-ed6","issue_id":"uncov-s2m","type":"blocks"}
47 changes: 47 additions & 0 deletions .beads/backup/events.jsonl
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{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":1,"issue_id":"uncov-0lq","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":2,"issue_id":"uncov-0ou","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":3,"issue_id":"uncov-0xe","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":4,"issue_id":"uncov-17j","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":5,"issue_id":"uncov-19b","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":6,"issue_id":"uncov-1e5","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":7,"issue_id":"uncov-1yi","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":8,"issue_id":"uncov-2bo","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":9,"issue_id":"uncov-2ur","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":10,"issue_id":"uncov-38c","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":11,"issue_id":"uncov-38p","new_value":"","old_value":""}
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{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":14,"issue_id":"uncov-4bm","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":15,"issue_id":"uncov-4du","new_value":"","old_value":""}
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{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":17,"issue_id":"uncov-5yk","new_value":"","old_value":""}
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{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":19,"issue_id":"uncov-6no","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":20,"issue_id":"uncov-77g","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":21,"issue_id":"uncov-a4f","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":22,"issue_id":"uncov-b90","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":23,"issue_id":"uncov-bq5","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":24,"issue_id":"uncov-brm","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":25,"issue_id":"uncov-cgy","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":26,"issue_id":"uncov-e27","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":27,"issue_id":"uncov-ed6","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":28,"issue_id":"uncov-efk","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":29,"issue_id":"uncov-ejy","new_value":"","old_value":""}
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{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":31,"issue_id":"uncov-fn0","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":32,"issue_id":"uncov-iz5","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":33,"issue_id":"uncov-kah","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":34,"issue_id":"uncov-l2y","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":35,"issue_id":"uncov-mc5","new_value":"","old_value":""}
{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":36,"issue_id":"uncov-mv8","new_value":"","old_value":""}
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{"actor":"Logan Lindquist Land","comment":null,"created_at":"2026-03-11T15:20:13Z","event_type":"created","id":47,"issue_id":"uncov-xg6","new_value":"","old_value":""}
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