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Fix filtering in Rmarkdown analysis #2

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Fix filtering in Rmarkdown analysis #2

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8 changes: 6 additions & 2 deletions scripts/middle_margin_tests.Rmd
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Original file line number Diff line number Diff line change
Expand Up @@ -18,10 +18,14 @@ library(ggplot2)
#import data
count_data <- readxl::read_excel(here('raw_data', 'zooplankton_count_data.xlsx'))

#filter it to the middle segment
# Filter it to the middle segment and remove the first subsamples

compare_data <- count_data %>%
filter(site %in% c("trevor_middle_margin", "trevor_middle_center"))
filter(site %in% c("trevor_middle_margin", "trevor_middle_center")) %>%
filter(
subsample_id != "trevor_middle_center_1" &
subsample_id != "trevor_middle_margin_1"
)
```

## Testing Assumptions
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