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@mcgilldinglab

McGill Ding Lab

Dr. Jun Ding's lab at McGill University

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  1. UNAGI UNAGI Public

    UNAGI: deep generative AI for virtual disease and unsuperivsed in-silico perturbations.

    Jupyter Notebook 51 13

  2. CellAgentChat CellAgentChat Public

    Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data

    Jupyter Notebook 35 6

  3. MATES MATES Public

    A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data

    Jupyter Notebook 32 4

  4. scSemiProfiler scSemiProfiler Public

    A computational method scSemiProfiler that provides affordable single-cell data for large-scale disease cohorts using deep generative model.

    Jupyter Notebook 26 2

  5. SIDISH SIDISH Public

    SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations

    Jupyter Notebook 17 5

  6. scCross scCross Public

    A Deep Learning-Based Model for the integration, cross-dataset cross-modality generation, self augmentation and matched multi-omics simulation of single-cell multi-omics data. Our model excels at m…

    Python 16 3

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