Requirements:
Install the softwares listed below
[1] MATLAB, https://www.mathworks.com/
[2] Diffusion Toolkit and TrackVis, http://www.trackvis.org/
References:
[1] Ye La, Allen WEa, Thompson KRa, Tian Q, Hsueh B, Ramakrishnan C, Wang AC, Jennings J, Adhikari A, Halpern CH, Witten IB, Barth AL, Luo L, McNab JA, Deisseroth K. Wiring and Molecular Features of Prefrontal Ensembles Representing Distinct Experiences. Cell, 2016; 165:1-13. DOI: 10.1016/j.cell.2016.05.010. (aCo-first Author)
[2] Tian Q, Leuze CWU, Tomer R, Ferenczi E, Zeineh M, Deisseroth K, McNab JA. Quantification of 3D Microscopic Tissue Features in CLARITY Data for Comparison with Diffusion MRI. In Proceedings of the 23rd Annual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM), Toronto, Ontario, Canada, 2015; Abstract 2766.
(c) Qiyuan Tian, McNab Lab, Stanford University
2016 December