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Update gradient data in 0055_gradient.tsv#236

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f-kretschmer merged 4 commits intomichaelwitting:masterfrom
albertogilf:patch-1
Apr 23, 2026
Merged

Update gradient data in 0055_gradient.tsv#236
f-kretschmer merged 4 commits intomichaelwitting:masterfrom
albertogilf:patch-1

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@albertogilf
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Update gradient data in 0055_gradient.tsv according to the chromatographic method described in https://www.sciencedirect.com/science/article/pii/S0003267012000062?via%3Dihub

albertogilf and others added 2 commits April 21, 2026 16:38
Update gradient data in 0055_gradient.tsv according to the chromatographic method described in https://www.sciencedirect.com/science/article/pii/S0003267012000062?via%3Dihub
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Preprocessing Report

0055

mode raw SMILES standardized SMILES Classyfire classifications descriptors
canonical 184 184 184 184
isomeric 77 77 77 77
nr
entries without rt 0
entries without SMILES 0
entries flagged by QSPR-based validation 14
entry-pairs flagged by retention order-based validation (datasets with identical setups) 0
entry-pairs flagged by retention order-based validation (systematic measurements) 0

Files successfully generated

✔️ RTdata canonical
✔️ RTdata isomeric
✔️ descriptors canonical
✔️ descriptors isomeric
✔️ metadata file
✔️ gradient file
✔️ report canonical
✔️ report isomeric

Failed isomeric classifications: reasons

status
missing SMILES 107

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This Pull Request is in "draft" status. When all issues (if any) are addressed, the status can manually be set to "ready for review". Subsequently, the temporary dataset IDs will be replaced with the final ones; then the Pull Request can be merged.

@albertogilf
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The main issue is in the gradient data not in the annotation!

@f-kretschmer
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Thank you for spotting this!

@f-kretschmer f-kretschmer merged commit 44e437d into michaelwitting:master Apr 23, 2026
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3 participants