National Microbiome Data Collaborative
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- metadata-for-user-facility-template-transformations Public
CLI tool to convert metadata submissions from the NMDC submission portal to user facility Excel templates
microbiomedata/metadata-for-user-facility-template-transformations’s past year of commit activity - external-metadata-awareness Public
Tools for fetching and processing external schemas, ontologies and metadata records. Includes value set maintenance and some GitHub org exploration.
microbiomedata/external-metadata-awareness’s past year of commit activity - ReadsQC Public
This workflow is a replicate of the QA protocol implemented at JGI for Illumina reads
microbiomedata/ReadsQC’s past year of commit activity - nmdc_api_utilities Public
A library designed to simplify various research tasks for users looking to leverage the NMDC (National Microbiome Data Collaborative) APIs. The library provides a collection of general-purpose functions that facilitate easy access, manipulation, and analysis of microbiome data.
microbiomedata/nmdc_api_utilities’s past year of commit activity - nmdc_notebooks Public
Jupyter Notebooks demonstrating R and Python-based access to NMDC metadata and data
microbiomedata/nmdc_notebooks’s past year of commit activity
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