snapzipsort: use ubam for alignment#183
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nvnieuwk
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Jul 9, 2026
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Why didn't I think of this 😅! Looks good!
nvnieuwk
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Jul 9, 2026
Co-authored-by: Nicolas Vannieuwkerke <101190534+nvnieuwk@users.noreply.github.com>
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SnapZipSort: Don't convert to fastq, but align straight from uBam
PR checklist
nf-core pipelines lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).