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Bump gitpython from 3.1.46 to 3.1.47#4216

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Bump gitpython from 3.1.46 to 3.1.47#4216
dependabot[bot] wants to merge 1 commit intomainfrom
dependabot/uv/gitpython-3.1.47

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@dependabot dependabot Bot commented on behalf of github Apr 26, 2026

Bumps gitpython from 3.1.46 to 3.1.47.

Release notes

Sourced from gitpython's releases.

3.1.47 - with security fixes

Advisories

What's Changed

New Contributors

Full Changelog: gitpython-developers/GitPython@3.1.46...3.1.47

Commits
  • 4199cb8 bump version to 3.1.47
  • 0f68db0 Merge pull request #2131 from WesR/main
  • 43d92de git.cmd: harden unsafe option canonicalization and isolate push test cases
  • 9aed7cf linter fix
  • 1421958 Block unsafe underscored git kwargs / Fix for GHSA-rpm5-65cw-6hj4
  • da54523 Merge pull request #2130 from gitpython-developers/fix-multi-options
  • c9a2678 Make sure that multi-options are checked after splitting them with shlex
  • 75e6c6b Merge pull request #2126 from ngie-eign/fix-execute-with_stdout-no-issues
  • 6fc4742 test_avoids_changing...: don't leave test artifacts behind
  • d966a0d git.cmd.Git.execute(..): fix with_stdout=False
  • Additional commits viewable in compare view

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Bumps [gitpython](https://github.com/gitpython-developers/GitPython) from 3.1.46 to 3.1.47.
- [Release notes](https://github.com/gitpython-developers/GitPython/releases)
- [Changelog](https://github.com/gitpython-developers/GitPython/blob/main/CHANGES)
- [Commits](gitpython-developers/GitPython@3.1.46...3.1.47)

---
updated-dependencies:
- dependency-name: gitpython
  dependency-version: 3.1.47
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot Bot added dependencies Pull requests that update a dependency file python:uv Pull requests that update python:uv code labels Apr 26, 2026
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This PR is against the main branch ❌

  • Do not close this PR
  • Click Edit and change the base to dev
  • This CI test will remain failed until you push a new commit

Hi @dependabot[bot],

It looks like this pull-request is has been made against the nf-core/tools main branch.
The main branch on nf-core repositories should always contain code from the latest release.
Because of this, PRs to main are only allowed if they come from the nf-core/tools dev branch.

You do not need to close this PR, you can change the target branch to dev by clicking the "Edit" button at the top of this page.
Note that even after this, the test will continue to show as failing until you push a new commit.

Thanks again for your contribution!

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