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<!DOCTYPE html> <html xmlns="http://www.w3.org/1999/xhtml" lang="en"> <head> <meta charset="utf-8" /> <title>Nistats: Functional MRI in Python — functional MRI for NeuroImaging</title> <link rel="stylesheet" href="_static/nature.css" type="text/css" /> <link rel="stylesheet" href="_static/pygments.css" type="text/css" /> <link rel="stylesheet" type="text/css" href="_static/gallery.css" /> <script id="documentation_options" data-url_root="./" src="_static/documentation_options.js"></script> <script src="_static/jquery.js"></script> <script src="_static/underscore.js"></script> <script src="_static/doctools.js"></script> <script src="_static/language_data.js"></script> <script src="_static/copybutton.js"></script> <link rel="shortcut icon" href="_static/favicon.ico"/> <link rel="search" title="Search" href="search.html" /> <link rel="prev" title="0.1.0rc" href="whats_new.html" /> <meta content="True" name="HandheldFriendly"> <meta name="viewport" content="width=device-width, initial-scale=1.0, maximum-scale=1.0, user-scalable=0"> <meta name="keywords" content="nistats, neuroimaging, python, neuroscience, statistics"> <script type="text/javascript"> $(function () { // Lock the table of content to a fixed position once we scroll enough var top = 105 + $('.sphinxsidebarwrapper').offset().top - parseFloat($('.sphinxsidebarwrapper').css('margin-top').replace(/auto/, 0)), sections = {}, i = 0, url = document.URL.replace(/#.*$/, ""), current_section = 0; // Grab positions of our sections $('.headerlink').each(function(){ sections[this.href.replace(url, '')] = $(this).offset().top - 50; }); $(window).scroll(function(event) { var pos = $(window).scrollTop(); // Lock the table of content to a fixed position once we scroll enough if(pos > top){ //begin to scroll $('.sphinxsidebarwrapper').css("position", "fixed"); $('.sphinxsidebarwrapper').css("top", -105); } else{ //lock it back into place $('.sphinxsidebarwrapper').css("position", "relative"); $('.sphinxsidebarwrapper').css("top",0); } // Highlight the current section $('a.internal').removeClass('active'); for(i in sections){ if(sections[i] > pos){ break; }; if($('a.internal[href$="' + i + '"]').is(':visible')){ current_section = i; }; } $('a.internal[href$="' + current_section + '"]').addClass('active'); }); }); </script> <script type="text/javascript"> var _gaq = _gaq || []; _gaq.push(['_setAccount', 'UA-41920728-1']); _gaq.push(['_trackPageview']); (function() { var ga = document.createElement('script'); ga.type = 'text/javascript'; ga.async = true; ga.src = ('https:' == document.location.protocol ? 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See <a class="reference external" href="https://github.com/nistats/nistats/labels/Easy">Easy issues</a> to get started.</p> <div class="section" id="submitting-a-bug-report"> <h2>Submitting a bug report<a class="headerlink" href="#submitting-a-bug-report" title="Permalink to this headline">¶</a></h2> <p>In case you experience issues using this package, do not hesitate to submit a ticket to the <a class="reference external" href="https://github.com/nilearn/nilearn/issues">Bug Tracker</a>. You are also welcome to post feature requests or pull requests.</p> </div> <div class="section" id="retrieving-the-latest-code"> <span id="git-repo"></span><h2>Retrieving the latest code<a class="headerlink" href="#retrieving-the-latest-code" title="Permalink to this headline">¶</a></h2> <p>We use <a class="reference external" href="http://git-scm.com/">Git</a> for version control and <a class="reference external" href="https://github.com/">GitHub</a> for hosting our main repository. If you are new on GitHub and don’t know how to work with it, please first have a look at <a class="reference external" href="https://try.github.io/">this</a> to get the basics.</p> <p>You can check out the latest sources with the command:</p> <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">git</span> <span class="n">clone</span> <span class="n">git</span><span class="p">:</span><span class="o">//</span><span class="n">github</span><span class="o">.</span><span class="n">com</span><span class="o">/</span><span class="n">nistats</span><span class="o">/</span><span class="n">nistats</span><span class="o">.</span><span class="n">git</span> </pre></div> </div> <p>or if you have write privileges:</p> <div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">git</span> <span class="n">clone</span> <span class="n">git</span><span class="nd">@github</span><span class="o">.</span><span class="n">com</span><span class="p">:</span><span class="n">nistats</span><span class="o">/</span><span class="n">nistats</span><span class="o">.</span><span class="n">git</span> </pre></div> </div> </div> <div class="section" id="coding-guidelines"> <h2>Coding guidelines<a class="headerlink" href="#coding-guidelines" title="Permalink to this headline">¶</a></h2> <p>Nistats follows the coding conventions used by scikit-learn. <a class="reference external" href="http://scikit-learn.org/stable/developers/contributing.html#coding-guidelines">Please read them</a> before you start implementing your changes.</p> </div> </div> </div> </div> </div> <div class="clearer"></div> </div> <div class="related" role="navigation" aria-label="related navigation"> <h3>Navigation</h3> <ul> <li class="right" style="margin-right: 10px"> <a href="py-modindex.html" title="Python Module Index" >modules</a></li> <li class="right" > <a href="whats_new.html" title="0.1.0rc" >previous</a> |</li> <li><a href="index.html">Nistats Home</a> | </li> <li><a href="user_guide.html">User Guide</a> | </li> <li><a href="auto_examples/index.html">Examples</a> | </li> <li><a href="modules/reference.html">Reference</a> | </li> <li id="navbar-about"><a href="authors.html">About</a>| </li> <li id="navbar-ecosystem"><a href="http://www.nipy.org/">Nipy ecosystem</a></li> </ul> </div> <div class="footer"> © The nistats developers 2010-2016. 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