Updated PyChromVar#18
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Added: - get_bg_peaks (deterministic KNN for chromVAR's real binned gaussian weighed sampling) - compute_deviations (now emits z-scores and deviations + QC) also fixed background to reoder cound cols - match_motif (implemented TODO sub there) Deps: - added pytest and pytest-xdist, dropped pynndescent, removed deprecated anndata APIs
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Added several new features and performance improvements.
Should be now a little bit closer to the actual ChromVar R package. Not fully, but a start.