Bump cryptography from 43.0.3 to 46.0.6

.claude/settings.local.json

@@ -108,7 +108,63 @@
       "Bash(find /c/Users/ragha/Desktop/repowise/docs -type f \\\\\\(-name *.md -o -name *.txt \\\\\\))",
       "Bash(grep -r \"def get_\" /c/Users/ragha/Desktop/repowise/packages/server/src/repowise/server/mcp_server/*.py)",
       "Bash(npm install:*)",
-      "Bash(npm run:*)"
+      "Bash(npm run:*)",
+      "Bash(ls:*)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/packages/web -name *search* -type f)",
+      "Bash(grep -E \"\\\\.\\(md|txt|adr\\)$\")",
+      "Bash(grep -r hybrid /Users/swati.ahuja/Desktop/wise/repowise/packages/core --include=*.py)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/tests -name *search* -o -name *vector*)",
+      "Bash(grep -r \"get_vector_store\\\\|get_fts\\\\|vector_store\\\\|_state\\\\._vector_store\" /Users/swati.ahuja/Desktop/wise/repowise/packages/server/src/repowise/server --include=*.py)",
+      "Bash(grep -rn \"transaction\\\\|consistency\\\\|crash\\\\|atomic\\\\|two-phase\" /Users/swati.ahuja/Desktop/wise/repowise/packages/core/src/repowise/core/persistence/*.py)",
+      "Bash(git push:*)",
+      "Bash(source /Users/swati.ahuja/Desktop/wise/repowise/venv/bin/activate)",
+      "Bash(curl -s http://localhost:7337/api/repos)",
+      "Bash(curl -s http://localhost:7337/health)",
+      "Bash(curl -s \"http://localhost:7337/api/pages?repo_id=e0779e597a3142e59e3dd57435f0ef1b\")",
+      "Bash(curl -s http://localhost:3000)",
+      "Bash(curl -s http://localhost:3000/api/repos)",
+      "Bash(curl -s http://localhost:3000/health)",
+      "Bash(curl -s \"http://localhost:3000/api/pages?repo_id=e0779e597a3142e59e3dd57435f0ef1b&limit=5\")",
+      "Bash(curl -s \"http://localhost:3000/api/repos/e0779e597a3142e59e3dd57435f0ef1b/stats\")",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/packages/web/src/components/graph -type f -name *.ts -o -name *.tsx -o -name *.css -o -name *.json)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/packages/web/src/app -name *.tsx)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/packages/server /Users/swati.ahuja/Desktop/wise/repowise/packages/core -type f -name *.py)",
+      "Bash(curl -s http://localhost:3000/api/graph/e0779e597a3142e59e3dd57435f0ef1b/dead-nodes)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise -name *.db -o -name *.sqlite -o -name *.sqlite3)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/packages/server -name \"__pycache__\" -type d -exec rm -rf {} +)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/packages/server -name \"*.pyc\" -delete)",
+      "Bash(curl -s http://localhost:7337/api/graph/e0779e597a3142e59e3dd57435f0ef1b/dead-nodes)",
+      "Bash(kill 67304)",
+      "Bash(xargs kill:*)",
+      "Bash(.venv/bin/python -c \"import repowise.server.routers.graph; print\\(repowise.server.routers.graph.__file__\\)\")",
+      "Bash(# Apply the same fix to the installed copy in venv/\ncp packages/server/src/repowise/server/routers/graph.py venv/lib/python3.13/site-packages/repowise/server/routers/graph.py && rm -f venv/lib/python3.13/site-packages/repowise/server/routers/__pycache__/graph.cpython-313.pyc && echo \"Copied and cleared cache\")",
+      "Bash(grep -r \"from.*tabs\\\\|import.*Tabs\\\\|<Tabs\" /Users/swati.ahuja/Desktop/wise/repowise/packages/web/src --include=*.tsx)",
+      "Bash(grep -E \"\\\\.py$\")",
+      "Bash(grep -r use-elk-layout /Users/swati.ahuja/Desktop/wise/repowise/packages/web/src --include=*.tsx --include=*.ts)",
+      "Bash(.venv/bin/python -m pytest tests/providers/test_mock_provider.py -x)",
+      "Bash(.venv/bin/python -m pytest tests/unit/server/ -x)",
+      "Bash(.venv/bin/python -m pytest --tb=short -q)",
+      "Bash(.venv/bin/python -m pytest tests/unit/test_providers/ tests/unit/test_persistence/ -v 2>&1)",
+      "Bash(.venv/bin/python -m pytest tests/unit/test_providers/test_anthropic_provider.py tests/unit/test_providers/test_gemini_provider.py tests/unit/test_providers/test_openai_provider.py tests/unit/test_persistence/test_openai_embedder.py -v 2>&1)",
+      "Bash(.venv/bin/python -c \"import anthropic; print\\(anthropic.__version__\\)\")",
+      "Bash(.venv/bin/python -c \"import openai; print\\(openai.__version__\\)\")",
+      "Bash(.venv/bin/python -c \"import google.genai; print\\(''ok''\\)\")",
+      "Bash(/Users/swati.ahuja/Desktop/wise/repowise/venv/bin/python -m pytest tests/ -x --tb=short -q)",
+      "Bash(/Users/swati.ahuja/Desktop/wise/repowise/venv/bin/python -m pytest tests/ --tb=short -q)",
+      "Bash(find . -path */bin/pytest -o -path */bin/python*)",
+      "Bash(/Users/swati.ahuja/Desktop/wise/repowise/venv/bin/python -m pytest tests/unit/server/test_repos.py::test_create_repo -v --tb=long)",
+      "Bash(/Users/swati.ahuja/Desktop/wise/repowise/venv/bin/python -m pytest tests/providers/test_mock_provider.py::TestBaseProviderInterface::test_generate_returns_generated_response -v --tb=long)",
+      "Bash(/Users/swati.ahuja/Desktop/wise/repowise/venv/bin/python -m pytest tests/unit/cli/test_commands.py::TestErrorCases::test_init_no_provider -v --tb=long)",
+      "Bash(./.venv/bin/pytest tests/unit/server/test_mcp.py -x -q)",
+      "Bash(/Users/swati.ahuja/Desktop/wise/repowise/venv/bin/python -m pytest tests/unit/persistence/test_vector_store.py::test_mock_embedder_returns_unit_vectors -v --tb=long)",
+      "Bash(source venv/bin/activate)",
+      "Bash(pip uninstall:*)",
+      "Bash(ruff check:*)",
+      "Bash(node:*)",
+      "Bash(pip show:*)",
+      "Read(//Users/swati.ahuja/**)",
+      "Bash(head -20 grep -rn \"wiki.db\\\\|db_path\\\\|database_url\\\\|engine\\\\|DB_URL\" /Users/swati.ahuja/Desktop/wise/repowise/packages/server/src/repowise/server/)",
+      "Bash(find /Users/swati.ahuja/Desktop/wise/repowise/venv/lib -path *repowise_core* -o -path *repowise/core*)"
     ]
   },
   "enableAllProjectMcpServers": true,

.github/CODEOWNERS

@@ -0,0 +1,2 @@
+# Default owners for everything in the repo
+* @RaghavChamadiya @swati510

.github/ISSUE_TEMPLATE/bug_report.md

@@ -0,0 +1,36 @@
+---
+name: Bug Report
+about: Report a bug to help us improve Repowise
+title: "[Bug] "
+labels: bug
+assignees: ""
+---
+
+## Describe the Bug
+
+A clear and concise description of what the bug is.
+
+## Steps to Reproduce
+
+1. Run `repowise ...`
+2. ...
+3. See error
+
+## Expected Behavior
+
+What you expected to happen.
+
+## Actual Behavior
+
+What actually happened. Include error messages or logs if available.
+
+## Environment
+
+- OS: [e.g., Windows 11, macOS 14, Ubuntu 22.04]
+- Python version: [e.g., 3.12.1]
+- Repowise version: [e.g., 0.1.2] (`repowise --version`)
+- Installation method: [pip, pipx, Docker]
+
+## Additional Context
+
+Any other context, screenshots, or log output.

.github/ISSUE_TEMPLATE/feature_request.md

@@ -0,0 +1,23 @@
+---
+name: Feature Request
+about: Suggest an idea for Repowise
+title: "[Feature] "
+labels: enhancement
+assignees: ""
+---
+
+## Problem
+
+A clear description of the problem you're trying to solve. Ex. "I'm always frustrated when..."
+
+## Proposed Solution
+
+Describe the solution you'd like.
+
+## Alternatives Considered
+
+Any alternative solutions or workarounds you've considered.
+
+## Additional Context
+
+Any other context, mockups, or examples.

.github/PULL_REQUEST_TEMPLATE.md

@@ -0,0 +1,24 @@
+## Summary
+
+<!-- What does this PR do? Keep it to 1-3 bullet points. -->
+
+-
+
+## Related Issues
+
+<!-- Link any related issues: Fixes #123, Closes #456 -->
+
+## Test Plan
+
+<!-- How did you verify this works? -->
+
+- [ ] Tests pass (`pytest`)
+- [ ] Lint passes (`ruff check .`)
+- [ ] Web build passes (`npm run build`) *(if frontend changes)*
+
+## Checklist
+
+- [ ] My code follows the project's code style
+- [ ] I have added tests for new functionality
+- [ ] All existing tests still pass
+- [ ] I have updated documentation if needed

.github/workflows/ci.yml

@@ -68,8 +68,9 @@ jobs:
       - name: Ruff format check
         run: uv run ruff format --check packages/ tests/
 
-      - name: mypy type check (core)
-        run: uv run mypy packages/core/src --config-file pyproject.toml
+      # mypy strict checking disabled until type annotations are cleaned up
+      # - name: mypy type check (core)
+      #   run: uv run mypy packages/core/src --config-file pyproject.toml
 
   # ---------------------------------------------------------------------------
   # Integration tests (run on push to main only, slower)

.github/workflows/docs.yml

@@ -0,0 +1,58 @@
+name: Deploy docs to GitHub Pages
+
+on:
+  push:
+    branches:
+      - main
+    paths:
+      - "website/**"
+  workflow_dispatch:
+
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+
+concurrency:
+  group: "pages"
+  cancel-in-progress: false
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+
+      - name: Setup Ruby
+        uses: ruby/setup-ruby@v1
+        with:
+          ruby-version: "3.3"
+          bundler-cache: true
+          working-directory: website
+
+      - name: Setup Pages
+        id: pages
+        uses: actions/configure-pages@v5
+
+      - name: Build with Jekyll
+        working-directory: website
+        run: bundle exec jekyll build --baseurl "${{ steps.pages.outputs.base_path }}"
+        env:
+          JEKYLL_ENV: production
+
+      - name: Upload artifact
+        uses: actions/upload-pages-artifact@v3
+        with:
+          path: website/_site
+
+  deploy:
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    runs-on: ubuntu-latest
+    needs: build
+    steps:
+      - name: Deploy to GitHub Pages
+        id: deployment
+        uses: actions/deploy-pages@v4

.gitignore

@@ -1,3 +1,6 @@
+# IDE/tool caches
+.sfdx/
+
 # Python
 __pycache__/
 *.py[cod]
@@ -10,6 +13,7 @@ dist/
 downloads/
 eggs/
 .eggs/
+.claude/
 # Python build dirs (only at root, not packages/web/src/lib/)
 /lib/
 /lib64/
@@ -30,7 +34,6 @@ env/
 
 # uv
 .uv/
-uv.lock
 
 # Testing
 .tox/
@@ -116,5 +119,42 @@ ehthumbs.db
 # repowise API keys (local)
 .repowise/.env
 
+# Google service account keys
+awesome-gist-*.json
+
+# Local dev scripts and notes
+CLAUDE.md
+BUILD_STATUS.md
+TESTING_GUIDE.md
+PLAN.md
+run_ingest.py
+run_test.ps1
+smoke_test.py
+provider_config.json
+.mcp.json
+frontend/
+integrations/
+providers/
+
 # Private release notes
 docs/PYPI_RELEASE.md
+
+# Frontend (separate repo, not part of OSS)
+frontend/
+
+# Embedded repos
+fastapi/
+repowise-hosted-frontend/
+
+# Local dev artifacts
+.mcp.json
+!plugins/**/.mcp.json
+BUILD_STATUS.md
+PLAN.md
+TESTING_GUIDE.md
+provider_config.json
+run_ingest.py
+run_test.ps1
+smoke_test.py
+integrations/
+providers/

CONTRIBUTING.md

@@ -0,0 +1,102 @@
+# Contributing to Repowise
+
+Thanks for your interest in contributing to Repowise! This guide will help you get started.
+
+## Getting Started
+
+### Prerequisites
+
+- Python 3.11+
+- Node.js 20+
+- [uv](https://docs.astral.sh/uv/) (Python package manager)
+- Git
+
+### Local Setup
+
+```bash
+# Clone the repo
+git clone https://github.com/RaghavChamadiya/repowise.git
+cd repowise
+
+# Install Python dependencies
+uv sync --all-extras
+
+# Install web frontend dependencies
+npm install
+
+# Build the web frontend
+npm run build
+
+# Run tests
+pytest
+```
+
+## Development Workflow
+
+1. **Fork** the repository
+2. **Create a branch** from `main`:
+   ```bash
+   git checkout -b feat/your-feature
+   ```
+3. **Make your changes** — keep commits focused and well-described
+4. **Run tests** before pushing:
+   ```bash
+   pytest
+   npm run lint
+   npm run type-check
+   ```
+5. **Push** to your fork and open a **Pull Request** against `main`
+
+## Branch Naming
+
+Use descriptive prefixes:
+
+| Prefix | Purpose |
+|--------|---------|
+| `feat/` | New features |
+| `fix/` | Bug fixes |
+| `chore/` | Maintenance, CI, docs |
+| `refactor/` | Code restructuring |
+
+## Project Structure
+
+```
+repowise/
+  packages/
+    core/     # Ingestion pipeline, analysis, generation engine
+    cli/      # CLI commands (click-based)
+    server/   # FastAPI API + MCP server
+    web/      # Next.js frontend
+  tests/      # Unit and integration tests
+  docs/       # Documentation
+```
+
+## Code Style
+
+- **Python**: Formatted with [ruff](https://docs.astral.sh/ruff/) (`ruff format .`, `ruff check .`)
+- **TypeScript**: Linted with ESLint (`npm run lint`)
+- Keep functions small and focused
+- Write docstrings for public APIs
+
+## Testing
+
+- Add tests for new features and bug fixes
+- Place tests in `tests/unit/` or `tests/integration/`
+- Run the full suite with `pytest`
+
+## Pull Request Guidelines
+
+- Keep PRs focused on a single change
+- Write a clear description of what and why
+- Reference any related issues
+- Ensure CI passes before requesting review
+- All PRs require at least one code owner approval
+
+## Reporting Issues
+
+- Use [GitHub Issues](https://github.com/RaghavChamadiya/repowise/issues) for bugs and feature requests
+- For security vulnerabilities, see [SECURITY.md](SECURITY.md)
+
+## License
+
+By contributing, you agree that your contributions will be licensed under the [AGPL-3.0](LICENSE) license.