A lecture on using PCA in Computational Biology
PCA2_quarto.qmd is the Quarto source for the version of this lecture presented in Toronto in 2026 at the CBHC conference.
Rendered outputs and intermediate build artifacts, such as HTML, PowerPoint, and _files/ directories, are generated from the source document and are not intended to be tracked in the repository.
In order to build the document you need to first run both SetUpGO.R and OSCAmultisample.R.
The latter takes quite a while to run, and you might instead just edit out those slides from the lecture.
There is a file, package_versions.csv that contains a list of all the packages you need.
They are obtained by running sessionInfo() after having sourced both of the other scripts.