Add old updates (WIP)

README.md

@@ -1,49 +1,53 @@
 [![DOI](https://zenodo.org/badge/67431697.svg)](https://zenodo.org/badge/latestdoi/67431697)
 
-# doi2bib and friends
-
-This repository provides scripts for converting from either [Digital Object Identifier (DOI)](https://www.doi.org) or [Uniform Resource Locator (URL)](https://en.wikipedia.org/wiki/URL) to [BibTeX](http://www.bibtex.org), or from DOI to plain text.
-
 <p align="center">
   <img alt="ASCII video" src="cast.svg">
 </p>
 
-## doi2bib
+TODO: support storing to the clipboard automatically.
+TODO: add the surname of the first author automatically if not given (if only the year is shown as id when retrieved)
 
-Convert [Digital Object Identifier (DOI)](https://www.doi.org) to
-[BibTeX](http://www.bibtex.org) using
-[crosscite.org](https://citation.crosscite.org/).
-DOIs are received and the corresponding BibTeX entries are output.
+# Bibliography in your command-line
 
-Inspired by <https://gist.github.com/mlund/4609288> and
-<http://www.doi2bib.org/>.
+This repository provides scripts for converting from either [Digital Object Identifier (DOI)](https://www.doi.org) or [Uniform Resource Locator (URL)](https://en.wikipedia.org/wiki/URL) to [BibTeX](http://www.bibtex.org), or from DOI to plain text.
+
+## `doi2bib`
 
-**October 16, 2017**: <http://www.doi2bib.org/> seems not to be working
-any more.
+Convert [Digital Object Identifier (DOI)](https://www.doi.org) to [BibTeX](http://www.bibtex.org) using [crosscite.org](https://citation.crosscite.org/).
+DOIs are received and the corresponding BibTeX entries are output.
+(Inspired by <https://gist.github.com/mlund/4609288> and <http://www.doi2bib.org/>.)
 
-## doi2text
+## `doi2text`
 
-Convert [Digital Object Identifier (DOI)](https://www.doi.org) to plain text
-using [crosscite.org](https://citation.crosscite.org/). DOIs are received and
-the corresponding text entries are output. In theory, all the styles
-available at <https://github.com/citation-style-language/styles> can be used.
+Convert [Digital Object Identifier (DOI)](https://www.doi.org) to plain text using [crosscite.org](https://citation.crosscite.org/).
+DOIs are received and the corresponding text entries are output. In theory, all the styles available at <https://github.com/citation-style-language/styles> can be used.
 
-## url2bib
+## `url2bib`
 
-Convert [Uniform Resource Locator (URL)](https://en.wikipedia.org/wiki/URL) to
-[BibTeX](http://www.bibtex.org) using pure
-[Bash](https://en.wikipedia.org/wiki/Bash_(Unix_shell)).
+Convert [Uniform Resource Locator (URL)](https://en.wikipedia.org/wiki/URL) to [BibTeX](http://www.bibtex.org) using pure [Bash](<https://en.wikipedia.org/wiki/Bash_(Unix_shell)>).
 URLs are received and the corresponding BibTeX entries are output.
+(This is made to be used exactly as one would use `doi2bib`.)
 
-(This is made to be used exactly as one would use doi2bib.)
+This requires `gawk` (`sudo apt install gawk`).
+
+## Dependencies
+
+`doi2bib` requires [curl](https://curl.haxx.se/):
+
+    $ sudo apt install curl
+
+You will also need `make` to install:
+
+    $ sudo apt install make
 
 ## Installation
 
 After downloading the tarball and using `cd` to go where the files are, simply do a `sudo make install` and everything will be installed.
+By default, it will install in `/usr/local/bin/`.
 
 ## Usage
 
-    $ doi2bib 10.1021/acs.jpcc.8b06244 10.1021/acscatal.9b00210                                
+    $ doi2bib 10.1021/acs.jpcc.8b06244 10.1021/acscatal.9b00210
     @article{Schneider_2018,
       title={How Do Secondary Phosphine Oxides Interact with Silver Nanoclusters? Insights from Computation},
       volume={122},
@@ -92,3 +96,7 @@ After downloading the tarball and using `cd` to go where the files are, simply d
       howpublished = {\url{https://github.com/schneiderfelipe/doi2bib}},
       note = {Accessed: 2020-01-27}
     }
+
+## Citing doi2bib
+
+If you use doi2bib in your research, please cite it.

src/bibmagic.py

@@ -0,0 +1,17 @@
+#!/usr/bin/env python
+
+import sys
+import bibtexparser as btp
+from bibtexparser.bparser import BibTexParser
+from bibtexparser.customization import homogenize_latex_encoding
+
+with open(sys.argv[1]) as bib_file:
+    parser = BibTexParser()
+    # parser.customization = homogenize_latex_encoding
+    bib_db = btp.load(bib_file, parser=parser)
+
+if len(sys.argv) > 2:
+    with open(sys.argv[2], 'w') as bib_file:
+        btp.dump(bib_db, bib_file)
+else:
+    print(btp.dumps(bib_db))

src/doi2bib

@@ -71,9 +71,12 @@ for doi in "$@"; do
   # we do some encoding as needed.
   doi=${doi//+/%2B}
   http_headers="Accept: text/bibliography; style=bibtex"
+
+  echo "$http_headers"
+  echo
 
   # we retrieve the data from https://doi.org/
-  curl -s -LH "$http_headers" "https://doi.org/${doi}" | \
+  curl -LH "$http_headers" "https://doi.org/${doi}" | \
     sed -e $'s/^ *//' \
         -e $'s/}, /},\\\n  /g' \
         -e $'s/, /,\\\n  /1' \

src/doi2text

@@ -34,7 +34,7 @@
 #?   -v  show version
 #?   -s  set ciation style from the ones given in
 #?       <https://github.com/citation-style-language/styles> (this is
-#?       "chicago-author-date" by default, see examples below)
+#?       "american-chemical-society" by default, see examples below)
 #?   -S  list all available citation styles and quit
 #?   -l  set locale from the ones given in
 #?       <https://github.com/citation-style-language/locales>, e.g. "pt-BR"
@@ -55,8 +55,9 @@
 #?   doi2text and doi2bib <https://github.com/schneiderfelipe/doi2bib>
 #?   are licensed under the MIT License.
 
+style="american-chemical-society"
+
 locale=$(locale | grep LANGUAGE | cut -d= -f2 | cut -d: -f1 | tr '_' '-')
-style="chicago-author-date"
 if [ ! $locale ]; then
   locale="en-US"
 fi
@@ -75,7 +76,7 @@ while getopts ":hvs:Sl:L" opt "$@"; do
       style="${OPTARG}"
       ;;
     S)  # list all styles
-      curl -s -X GET \
+      curl -X GET \
         https://api.github.com/repos/citation-style-language/styles/contents/\?ref\=master | \
         sed -e '/"name":.*\.csl"/{s/\s*"name": "//;s/\.csl",\s*//;p};d'
       exit 0
@@ -84,7 +85,7 @@ while getopts ":hvs:Sl:L" opt "$@"; do
       locale="${OPTARG}"
       ;;
     L)  # list all styles
-      curl -s -X GET \
+      curl -X GET \
         https://api.github.com/repos/citation-style-language/locales/contents/\?ref\=master | \
         sed -e '/"name":.*\.xml"/{s/\s*"name": "//;s/\.xml",\s*//;s/locales-//;p};d'
       exit 0
@@ -108,7 +109,10 @@ for doi in "$@"; do
   # we do some encoding as needed.
   doi=${doi//+/%2B}
   http_headers="Accept: text/x-bibliography; style=${style}; locale=${locale}"
+
+  echo "$http_headers"
+  echo
 
   # we retrieve the data from https://doi.org/
-  curl -s -LH "$http_headers" "https://doi.org/${doi}"
+  curl -LH "$http_headers" "https://doi.org/${doi}"
 done