Skip to content

Update _dendrogram.py #2765

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Closed
Leo-GG wants to merge 1 commit into from
Closed

Update _dendrogram.py #2765

Changes from all commits
Commits
Show all changes
1 commit
Select commit
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion scanpy/tools/_dendrogram.py
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -134,7 +134,7 @@ def dendrogram(
rep_df.set_index(categorical, inplace=True)
categories = rep_df.index.categories
else:
gene_names = adata.raw.var_names if use_raw else adata.var_names
gene_names = var_names
from ..plotting._anndata import _prepare_dataframe

categories, rep_df = _prepare_dataframe(adata, gene_names, groupby, use_raw)
Expand Down