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seamusrobertmurphy/README.md

Seamus Murphy

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I am a forester interested in enhanced forest inventories, carbon modelling, landcover change mapping and spatial patterns of disturbance ecology. Past repositories include resource & stakeholder mapping, household consumption & nutrition, livelihood & value chain analysis. Happy coding.


Projects

  • VM0048 Jurisdictional REDD+ guide to Verra’s consolidated methodology, including jurisdictional baseline emissions estimates, spatial deforestation risk mapping, and leakage belt delineation (2025-01-04).

  • VM0047 ARR Feasibility framework for assessing land degradation, forest change, and soil carbon stocks of potential ARR projects pursuant to VM0047 methodology (2024-10-17).

  • VM0010 IFM Template for MRV reporting template for Improved Forest Management projects, with standardized procedures for inventory, carbon stock, and logging emissions reporting (2024-11-04).

  • VT0007 JREDD+ Risk Mapping toolkit for mapping deforestation risk factors using satellite data and socioeconomic indicators for jurisdictional REDD+ programs (2024-11-06).

  • ART-TREES Demo Repository showcasing best practices in version control for reproducible GHG calculation workflows under ART-TREES methodology (2025-08-11).

  • ART-TREES Monte Carlo Script for applying resampling technique to uncertainty estimation of REDD+ emission factors and activity data in compliance with ART-TREES Standard V2.0 (2024-12-19).

  • ART-TREES Monte Carlo Platform: Interactive Shiny application for uncertainty quantification and hyperparameter tuning in REDD+ carbon accounting, featuring normality testing, distribution fitting, bootstrap resampling, and machine learning-based uncertainty reduction for emission factors and activity data (2024-11-14).

  • ART-TREES Allometry Vallidator for validating and calibrating allometric biomass models to comply with ART-TREES requirements, focusing on statistical bias correction (2025-02-16).

  • REDD+ Uncertainty Training: Foundational training curriculum on uncertainty quantification in jurisdictional REDD+ carbon accounting, covering allometric equations, emission factors, activity data, and Monte Carlo error propagation methods in compliance with ART-TREES Standard V2.0 and IPCC 2019 guidelines (2026-01-09).

  • CFFDRS Canadian Forest Fire Danger Rating System pipeline for reproducible wildfire risk mapping, fuel typing and burn prediction metrics in British Columbia's Okanagan Watershed using the updated CFFDRS V2.0 framework and cffdrs package (2022-02-24).

  • Maps Templates for Interactive and Static Site Maps of field operations, site visualization, and landscape analysis, including symbology and layout generation (2024-12-04).

  • LiDAR Forest Height Analysis workflow combining LiDAR and photogrammetric data for forest inventory planning, including automated tree top detection and stand structure analysis (2023-10-15).

  • LiDAR Point Clouds Processing workflow for High-Resolution Terrain and Canopy Modeling from Airborne LiDAR Data (2021-11-09).

  • Wetlands Delineation Using SAR & Landsat Workflow for mapping endorheic wetland dynamics combining Sentinel-1 and Landsat time series with community ecological knowledge (2024-06-15).

  • GeoODK Geolocated Survey Build template using open-source mobile data collection tools for socioeconomic field surveys with customizable and automated quality control protocols (2018-02-05).


Languages & Platforms

ubuntu bash rstudio R vscode heroku sqlite Dynamics365 35 Knitr quartoshiny Python PostgreSQL Docker Jupyter Sentinel


Tools & Packages

Knitr shiny QGIS WhiteboxTools geocompr ArcGIS Pro Sentinel Hub eemont awesome-ee GEE Catalog Code Editor


Spatial Libraries

git git quarto stars MODIStsp PostGIS GRASS GIS rasterio geopandas OPENFORIS SEPAL Collect Earth


Workspaces

spectral Code Editor

Stats & Gists

Pinned Loading

  1. lidR-point-cloud-processing lidR-point-cloud-processing Public

    TeX

  2. enhanced-forest-inventory-model-assessment enhanced-forest-inventory-model-assessment Public

    TeX

  3. darkwoods_seedlings darkwoods_seedlings Public

  4. ash-dieback-stem-map ash-dieback-stem-map Public