feat: Add new example custom Studios documentation [EDU-985]#1109
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justinegeffen wants to merge 9 commits intomasterfrom
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feat: Add new example custom Studios documentation [EDU-985]#1109justinegeffen wants to merge 9 commits intomasterfrom
justinegeffen wants to merge 9 commits intomasterfrom
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Add comprehensive documentation for custom Studios examples including: - Marimo (reactive Python notebooks) - Streamlit (interactive web apps with MultiQC demo) - CELLxGENE (single-cell data visualization) - Shiny (R-based interactive web apps) - TTYD (web-based terminal) - IGV (genomic data browser) Includes deployment instructions, prerequisites, and guidance on providing files via environment variables and data-links. References GitHub repository: seqeralabs/custom-studios-examples Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>
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Signed-off-by: Justine Geffen <justinegeffen@users.noreply.github.com>
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Signed-off-by: Justine Geffen <justinegeffen@users.noreply.github.com>
Signed-off-by: Justine Geffen <justinegeffen@users.noreply.github.com>
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@pinin4fjords, @FloWuenne: This PR should address the requests for Studios repos - please take a look when you have a chance. Thanks! |
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Feb 18, 2026
platform-enterprise_versioned_docs/version-25.3/studios/example-studios.md
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| #### Data-links {#data-links} | ||
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| Data links point to specific cloud storage paths. When you create a data-link, the linked directory appears in the running Studio at `/workspace/data/<data_link_name>/`. To create a data-link: |
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Should we hyphenate data links as we do elsewhere? Not sure, but we should be consistent (probably inherited from the blog, so my fault)
| - **Dockerfile**: [igv/Dockerfile](https://github.com/lpantano/custom-studios-examples/tree/master/igv) | ||
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| :::note | ||
| The IGV example is available in a [community fork](https://github.com/lpantano/custom-studios-examples) of the examples repository. It has not yet been merged into the main repository. |
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I wonder if we could persuade Lorena to PR it - @kenibrewer ?
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Claude has link suggestions: |
…e-studios.md Co-authored-by: Jonathan Manning <pininforthefjords@gmail.com> Signed-off-by: Justine Geffen <justinegeffen@users.noreply.github.com>
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Closes: https://seqera.atlassian.net/browse/EDU-985
Adds documentation for custom Studios examples including:
Includes deployment instructions, prerequisites, and guidance on providing files via environment variables and data-links.