Batch primer design for genomic regions
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Dec 18, 2018 - Jupyter Notebook
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primer3
Here are 9 public repositories matching this topic...
A high-performance Rust implementation of primer3 design, leveraging PyO3 to interface with Python's primer3 package. This tool provides fast and reliable primer design for qPCR applications with thermodynamic filtering.
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Mar 27, 2026 - Rust
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Jan 25, 2018 - R
A collection of simple python tools for molecular biology and bioinformatics
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May 15, 2023 - Python
Species-specific primer design tool: NCBI retrieval → BLAST mismatch analysis → Primer3 design → Primer-BLAST validation. Desktop GUI (PySide6) + PDF/DOCX reports.
python bioinformatics blast pcr ncbi primer-design primer3 molecular-diagnostics pyside6 species-specific
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Apr 14, 2026 - Python
Python CLI for validating primers and preparing Primer3 inputs with NCBI Primer-BLAST workflows.
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Apr 16, 2026 - Python
One-command macOS toolkit: species name → NCBI fetch → Primer3 design → DNA Dynamo visualization. For GCA (Gut Content Analysis) primer design.
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Apr 8, 2026 - Python
Simple shiny app to analyze primer quality.
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Apr 4, 2023 - R
A web app interface for Primer3 using Streamlit and primer3-py, modeled after Primer3Plus
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Apr 10, 2026 - Python
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