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slide-seq

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Tepeng0213 / An-atlas-of-healthy-and-injured-cell-states-and-niches-in-the-human-kidney

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Human kidney healthy & injured cell-state atlas (Lake et al. Nature 2023) — computational reproduction: sn/scRNA-seq · Visium · Slide-seq · KPMP niches. Colab-ready notebook for multi-omics & spatial figure reanalysis.

machine-learning bioinformatics systems-biology jupyter-notebook computational-biology kidney single-cell nature multi-omics chronic-kidney-disease google-colab seurat spatial-transcriptomics nephrology scanpy cell-atlas visium slide-seq single-nucleus-rna-seq kpmp
  • Updated Jul 7, 2026
  • Jupyter Notebook

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