Transform coordinates by a RateMap #490
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please take a glance at this when you have a chance @hyanwong . The plan is ultimately to internally transform the tree sequence to a "mutational unit" coordinate system (which might imply removing some edges/mutations in zero-rate intervals), do the dating, then copy the dates/posteriors over the the tree sequence in the original coordinate system. There's some tricky details to sort out, so I'm going to do this in pieces. |
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Some infrastructure for supporting mutation rate maps