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Install Docker Python packages in an isolated venv #1001

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Install Docker Python packages in an isolated venv #1001

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9 changes: 7 additions & 2 deletions Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -63,6 +63,7 @@ RUN apt-get update -qq \
less \
libisal2 \
nano \
python3-venv \
vim \
&& apt-get clean \
&& rm -rf /var/lib/apt/lists/*
Expand All @@ -78,8 +79,13 @@ RUN apt-get update -qq \
RUN curl -L https://rclone.org/install.sh | bash

# Python packages
ENV TRAINING_MODULES_PYTHON=/opt/training-modules-python
ENV VIRTUAL_ENV=${TRAINING_MODULES_PYTHON}
ENV PATH="${TRAINING_MODULES_PYTHON}/bin:${PATH}"
COPY requirements.txt requirements.txt
RUN pip install -r requirements.txt --break-system-packages
RUN python3 -m venv ${TRAINING_MODULES_PYTHON} \
&& ${TRAINING_MODULES_PYTHON}/bin/python -m pip install --upgrade pip \
&& ${TRAINING_MODULES_PYTHON}/bin/pip install -r requirements.txt

# Use renv for R packages
WORKDIR /usr/local/renv
Expand Down Expand Up @@ -130,4 +136,3 @@ RUN python3 ${template_dir}/scripts/setup-skel.py \
--module-file ${template_dir}/current-modules.json

WORKDIR /home/rstudio