[codex] patch Vite security advisory#1

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Vedasheersh wants to merge 37 commits intotheproteinbot:mainfrom

Vedasheersh:codex/vite-security-fix

Commits on Feb 28, 2026

Fix prediction pipeline robustness and checkpoint compatibility
theproteinbot
committed
Update setup and usage docs for resilient local workflows
theproteinbot
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Phase 0: harden inference runtime and packaging entrypoints
theproteinbot
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Phase 1: extract reusable inference service core
theproteinbot
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Phase 2: add web API and optional modal backend routing
theproteinbot
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Phase 3.1: harden API request surface and path guardrails
theproteinbot
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Phase 3.2: unify packaging metadata via setup.cfg
theproteinbot
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Phase 3.3: centralize deserialization policy and enforce trusted roots
theproteinbot
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Merge pull request #33 from theproteinbot/codex/e2e-fixes
Vedasheersh
authored
docs: align API checkpoint_dir guidance with current guardrails
theproteinbot
committed

Commits on Mar 1, 2026

Commits on Mar 10, 2026

Commits on Mar 11, 2026

fix(ci): avoid secrets in deploy workflow conditionals
theproteinbot
committed

Commits on Mar 15, 2026

Commits on Mar 16, 2026

Remove CI/CD section and incorrect fine-tuning section from README
Vedasheersh
authored

Commits on Apr 7, 2026

fix(frontend): patch vite security advisory
theproteinbot
committed